RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 GATBO75879 557 aaKnown RBP12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 SIX3O95343 332 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 AGR2O95994 175 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 CEBPBP17676 345 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 DRD1P21728 446 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 ATP4BP51164 291 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 TMBIM6P55061 237 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 PTPRCAPQ14761 206 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 CDKL4Q5MAI5 379 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 TNFAIP8L2Q6P589 184 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 PGM2L1Q6PCE3 622 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 ACOT12Q8WYK0 555 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 BIRC7Q96CA5 298 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 MAPKAP1Q9BPZ7 522 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 IFT27Q9BW83 186 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 SERINC1Q9NRX5 453 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 UTS2RQ9UKP6 389 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 MEMO1Q9Y316 297 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 MAB21L2Q9Y586 359 aa12.82□□□□□ -0.36
RAPGEF1-201ENST00000372189 HTRA2O43464 458 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 VEGFDO43915 354 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 LINGO3P0C6S8 592 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 NKX6-1P78426 367 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 SGCBQ16585 318 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 ADGRG6Q86SQ4 1221 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 TOMM5Q8N4H5 51 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 C1orf52Q8N6N3 182 aaKnown RBP12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 C2CD4AQ8NCU7 369 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 CEP76Q8TAP6 659 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 PYURFQ96I23 114 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 COL21A1Q96P44 957 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 SLC30A2Q9BRI3 323 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZNF649Q9BS31 505 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 OR51V1Q9H2C8 321 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZNF395Q9H8N7 513 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 LTBP4Q8N2S1 1624 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 LOC102724200A0A096LPH7 203 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 CAV3P56539 151 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 TXNL4AP83876 142 aaKnown RBP12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 PCLAFQ15004 111 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 TMEM156Q8N614 296 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 FIZ1Q96SL8 496 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZIC5Q96T25 663 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 RPF2Q9H7B2 306 aaKnown RBP12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 LIN28AQ9H9Z2 209 aaKnown RBP12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 MARK1Q9P0L2 795 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 POLHQ9Y253 713 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 PCDHGB1Q9Y5G3 927 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 A8MV72 311 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 CLIC1O00299 241 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 ARHGEF15O94989 841 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 HMGN1P05114 100 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 ENGP17813 658 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 RBM34P42696 430 aaKnown RBP12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 GRHL2Q6ISB3 625 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 SMARCD3Q6STE5 483 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 TTC9BQ8N6N2 239 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 SCAMP4Q969E2 229 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 TPSD1Q9BZJ3 242 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 MCCC2Q9HCC0 563 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 AMBNQ9NP70 447 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 FZD4Q9ULV1 537 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 CMAHPQ9Y471 501 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 TMEM233B4DJY2 109 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 TMEM189-UBE2V1I3L0A0 370 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 B4GALT2O60909 372 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 HEXBP07686 556 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 GSTM3P21266 225 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 CD70P32970 193 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 GBX2P52951 348 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 CASP9P55211 416 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 TGFBIQ15582 683 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 XKR5Q6UX68 686 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 TMIGD1Q6UXZ0 262 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 LRRTM3Q86VH5 581 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 MARCH9Q86YJ5 346 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 FAM160A2Q8N612 972 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 C15orf40Q8WUR7 153 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 FBXL20Q96IG2 436 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 LMAN1LQ9HAT1 526 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZCCHC3Q9NUD5 404 aaKnown RBP12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 GPRC5BQ9NZH0 403 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 PGAP2Q9UHJ9 254 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 RNF6Q9Y252 685 aa12.81□□□□□ -0.36
RAPGEF1-201ENST00000372189 A0A1W2PP18 115 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 SEMA4FO95754 770 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 PLGP00747 810 aaPredicted RBP12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 FPR1P21462 350 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 ACRV1P26436 265 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 HMGCS1Q01581 520 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 MSS51Q4VC12 460 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 C1orf220Q5T0J3 134 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 ASB18Q6ZVZ8 466 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 MR1Q95460 341 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 GPR22Q99680 433 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 CCDC106Q9BWC9 280 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 KCNH6Q9H252 994 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 TMEM45AQ9NWC5 275 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 APOBEC3BQ9UH17 382 aaKnown RBP12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 FLVCR2Q9UPI3 526 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms