RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 AGPAT4Q9NRZ5 378 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 INTS10Q9NVR2 710 aaKnown RBP14.17□□□□□ -0.14
LMO4-201ENST00000370542 SMPD3Q9NY59 655 aaPredicted RBP14.17□□□□□ -0.14
LMO4-201ENST00000370542 TCAF1Q9Y4C2 921 aa14.17□□□□□ -0.14
LMO4-201ENST00000370542 CCDC88CQ9P219 2028 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 RNF103-CHMP3A0A140T963 221 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 K7EPI3 171 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 SLCO2B1O94956 709 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 CD63P08962 238 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 RBP1P09455 135 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 CBSLP0DN79 551 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 ZNF24P17028 368 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 HOXB6P17509 224 aaKnown RBP14.16□□□□□ -0.14
LMO4-201ENST00000370542 AGXTP21549 392 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 PKLRP30613 574 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 CBSP35520 551 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 CCL11P51671 97 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 GABARAPL2P60520 117 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 SEMA3AQ14563 771 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 SSPNQ14714 243 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 PTCHD3Q3KNS1 767 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 AGKQ53H12 422 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 AARS2Q5JTZ9 985 aaKnown RBP14.16□□□□□ -0.14
LMO4-201ENST00000370542 DEPDC1Q5TB30 811 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 FAM69BQ5VUD6 431 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 GPR107Q5VW38 600 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 MRPL14Q6P1L8 145 aaKnown RBP14.16□□□□□ -0.14
LMO4-201ENST00000370542 PAOXQ6QHF9 649 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 CNTN4Q8IWV2 1026 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 GPR135Q8IZ08 494 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 GALNT11Q8NCW6 608 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 PAPD5Q8NDF8 572 aaKnown RBP14.16□□□□□ -0.14
LMO4-201ENST00000370542 TRPV3Q8NET8 790 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 FDCSPQ8NFU4 85 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 OR13F1Q8NGS4 319 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 IP6K3Q96PC2 410 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 DCUN1D5Q9BTE7 237 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 SPRTNQ9H040 489 aaPredicted RBP14.16□□□□□ -0.14
LMO4-201ENST00000370542 ANKHQ9HCJ1 492 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 ZNF358Q9NW07 568 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 SPATA7Q9P0W8 599 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 ABCD2Q9UBJ2 740 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 PACSIN3Q9UKS6 424 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 ZNF451Q9Y4E5 1061 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 MAP4K5Q9Y4K4 846 aa14.16□□□□□ -0.14
LMO4-201ENST00000370542 CCDC78A2IDD5 438 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 CLDN25C9JDP6 229 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 SOCS2O14508 198 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 KDM1AO60341 852 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 DLX3O60479 287 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 VPS4BO75351 444 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 OR2B3O76000 313 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 SEC14L2O76054 403 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 STMN1P16949 149 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 AOAHP28039 575 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 RAB28P51157 221 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 RRADP55042 308 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 SOX8P57073 446 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 RAB10P61026 200 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 PRAMEP78395 509 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 C6orf10Q5SRN2 563 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 UNC5DQ6UXZ4 953 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 GK5Q6ZS86 529 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 KCTD8Q6ZWB6 473 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 USP51Q70EK9 711 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 ZC3HC1Q86WB0 502 aaKnown RBP14.15□□□□□ -0.14
LMO4-201ENST00000370542 ATCAYQ86WG3 371 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 VRK3Q8IV63 474 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 TMEM151AQ8N4L1 468 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 CBR4Q8N4T8 237 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 RNF148Q8N7C7 305 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 Q8NA96 180 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 LINC01555Q8NAE3 123 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 SSC4DQ8WTU2 575 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 ASZ1Q8WWH4 475 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 NACC2Q96BF6 587 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 TSPAN17Q96FV3 270 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 KIFC1Q9BW19 673 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 NUDT9Q9BW91 350 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 P2RY12Q9H244 342 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 RAD21L1Q9H4I0 556 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 TREX1Q9NSU2 369 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 SLC39A10Q9ULF5 831 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 PADI2Q9Y2J8 665 aa14.15□□□□□ -0.14
LMO4-201ENST00000370542 ESPL1Q14674 2120 aa14.14□□□□□ -0.15
LMO4-201ENST00000370542 PRORSD1PA6NEY8 169 aa14.14□□□□□ -0.15
LMO4-201ENST00000370542 C9J4A7 227 aa14.14□□□□□ -0.15
LMO4-201ENST00000370542 STX16-NPEPL1H3BU86 382 aa14.14□□□□□ -0.15
LMO4-201ENST00000370542 PFDN6O15212 129 aa14.14□□□□□ -0.15
LMO4-201ENST00000370542 PRICKLE3O43900 615 aaPredicted RBP14.14□□□□□ -0.15
LMO4-201ENST00000370542 TIPRLO75663 272 aa14.14□□□□□ -0.15
LMO4-201ENST00000370542 AGFG2O95081 481 aa14.14□□□□□ -0.15
LMO4-201ENST00000370542 HPRP00739 348 aa14.14□□□□□ -0.15
LMO4-201ENST00000370542 CTSBP07858 339 aa14.14□□□□□ -0.15
LMO4-201ENST00000370542 PAMP19021 973 aa14.14□□□□□ -0.15
LMO4-201ENST00000370542 TCN1P20061 433 aaPredicted RBP14.14□□□□□ -0.15
LMO4-201ENST00000370542 DCTP40126 519 aa14.14□□□□□ -0.15
LMO4-201ENST00000370542 SERPINB10P48595 397 aa14.14□□□□□ -0.15
LMO4-201ENST00000370542 MRPL19P49406 292 aaKnown RBP14.14□□□□□ -0.15
LMO4-201ENST00000370542 EIF2B2P49770 351 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms