RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 PFKMP08237 780 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 HSD3B1P14060 373 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 HSD3B2P26439 372 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 BTN3A2P78410 334 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 SP3Q02447 781 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 Q6ZNX1 250 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 KLBQ86Z14 1044 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 SH3RF2Q8TEC5 729 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 GPRC5BQ9NZH0 403 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 A0A1B0GVT2 93 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 LYRM1O43325 122 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 CHP2O43745 196 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 RGS9O75916 674 aaPredicted RBP15.28■□□□□ 0.04
COL17A1-202ENST00000369733 ETFAP13804 333 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 FSHRP23945 695 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 AKT2P31751 481 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 SHMT2P34897 504 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 PGDP52209 483 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 TOR1AIP1Q5JTV8 583 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 PM20D1Q6GTS8 502 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 GDF6Q6KF10 455 aaPredicted RBP15.28■□□□□ 0.04
COL17A1-202ENST00000369733 B3GNT8Q7Z7M8 397 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 P2RY13Q9BPV8 354 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 SLC39A1Q9NY26 324 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 LOC100509620A0A075B734 347 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 C13orf42A0A1B0GVH6 325 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 EDIL3O43854 480 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 MPC1LP0DKB6 136 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 ITGAMP11215 1152 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 MAPK3P27361 379 aaPredicted RBP15.28■□□□□ 0.04
COL17A1-202ENST00000369733 CLCN7P51798 805 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 GRK1Q15835 563 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 UPP1Q16831 310 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 TPGS2Q68CL5 300 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 OR2T33Q8NG76 320 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 OR4K3Q96R72 315 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 GAL3ST4Q96RP7 486 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 GORASP2Q9H8Y8 452 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 SARDHQ9UL12 918 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 NAV1Q8NEY1 1877 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 IGKV6-21A0A0C4DH24 114 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 H3BSH0 61 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 M0R036 132 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 ACP5P13686 325 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 TNFRSF1BP20333 461 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 MAGEA11P43364 429 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 E2F1Q01094 437 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 ATXN7L3Q14CW9 347 aaPredicted RBP15.28■□□□□ 0.04
COL17A1-202ENST00000369733 TXNDC8Q6A555 127 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 AMIGO3Q86WK7 504 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 NANSQ9NR45 359 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 B4GALT6Q9UBX8 382 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 ACSL6Q9UKU0 697 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 HEBP2Q9Y5Z4 205 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 LDB2O43679 373 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 ZNF26P17031 533 aaPredicted RBP15.28■□□□□ 0.04
COL17A1-202ENST00000369733 SLC6A6P31641 620 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 SNTB2Q13425 540 aaKnown RBP15.28■□□□□ 0.04
COL17A1-202ENST00000369733 EIF4HQ15056 248 aaKnown RBP15.28■□□□□ 0.04
COL17A1-202ENST00000369733 MICAQ29983 383 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 UAP1L1Q3KQV9 507 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 AGAP6Q5VW22 663 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 SETD6Q8TBK2 473 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 COQ8BQ96D53 544 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 AGAP4Q96P64 663 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 IL37Q9NZH6 218 aa15.28■□□□□ 0.04
COL17A1-202ENST00000369733 FARSAQ9Y285 508 aaKnown RBP15.28■□□□□ 0.04
COL17A1-202ENST00000369733 APODP05090 189 aa15.27■□□□□ 0.04
COL17A1-202ENST00000369733 HTR1AP08908 422 aa15.27■□□□□ 0.04
COL17A1-202ENST00000369733 SMIM18P0DKX4 95 aa15.27■□□□□ 0.04
COL17A1-202ENST00000369733 C22orf39Q6P5X5 142 aa15.27■□□□□ 0.04
COL17A1-202ENST00000369733 UBE2Q1Q7Z7E8 422 aa15.27■□□□□ 0.04
COL17A1-202ENST00000369733 OR8S1Q8NH09 359 aa15.27■□□□□ 0.04
COL17A1-202ENST00000369733 TFGQ92734 400 aaPredicted RBP15.27■□□□□ 0.04
COL17A1-202ENST00000369733 MUL1Q969V5 352 aa15.27■□□□□ 0.04
COL17A1-202ENST00000369733 IGKV6D-21A0A0A0MT36 114 aa15.27■□□□□ 0.04
COL17A1-202ENST00000369733 AQP9O43315 295 aa15.27■□□□□ 0.04
COL17A1-202ENST00000369733 APOC3P02656 99 aa15.27■□□□□ 0.04
COL17A1-202ENST00000369733 PRKCDQ05655 676 aa15.27■□□□□ 0.04
COL17A1-202ENST00000369733 ODF4Q2M2E3 257 aa15.27■□□□□ 0.04
COL17A1-202ENST00000369733 BCL2L15Q5TBC7 163 aa15.27■□□□□ 0.04
COL17A1-202ENST00000369733 TMEM145Q8NBT3 493 aa15.27■□□□□ 0.04
COL17A1-202ENST00000369733 COQ3Q9NZJ6 369 aa15.27■□□□□ 0.04
COL17A1-202ENST00000369733 PLEKHA6Q9Y2H5 1048 aa15.27■□□□□ 0.04
COL17A1-202ENST00000369733 A0A1W2PPK0 400 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 MTMR11A4FU01 709 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 ADAP00813 363 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 LHCGRP22888 699 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 EDNRBP24530 442 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 PCSK6P29122 969 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 UQCRC1P31930 480 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 CLCNKAP51800 687 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 RBM23Q86U06 439 aaKnown RBP15.27■□□□□ 0.03
COL17A1-202ENST00000369733 PARP16Q8N5Y8 322 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 RHOXF1Q8NHV9 184 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 CYB5D2Q8WUJ1 264 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 TMEM174Q8WUU8 243 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 A0A1W2PRU2 124 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 GLOD5A6NK44 160 aa15.27■□□□□ 0.03
COL17A1-202ENST00000369733 PPP6CO00743 305 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms