RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 SNX18Q96RF0 628 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 ZIC5Q96T25 663 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 COQ7Q99807 217 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 YIPF4Q9BSR8 244 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 MTG2Q9H4K7 406 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 RRAGCQ9HB90 399 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 NLKQ9UBE8 527 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 SLC25A13Q9UJS0 675 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 STUB1Q9UNE7 303 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 RPL36Q9Y3U8 105 aaKnown RBP7.81□□□□□ -1.16
CD46-208ENST00000367042 HSPB11Q9Y547 144 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 HTTP42858 3142 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 C1orf226A1L170 272 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 PRAMEF25A6NGN4 478 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 SGTAO43765 313 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 LZTS3O60299 673 aaPredicted RBP7.81□□□□□ -1.16
CD46-208ENST00000367042 UGT2B17O75795 530 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 CHRNB1P11230 501 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 PTPN2P17706 415 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 RFX2P48378 723 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 CTSCP53634 463 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 EPHB3P54753 998 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 C17orf99Q6UX52 265 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 NLRP8Q86W28 1048 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 ZNF740Q8NDX6 193 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 WDR20Q8TBZ3 569 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 SLC9A6Q92581 669 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 NACC2Q96BF6 587 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 SCLYQ96I15 445 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 LRR1Q96L50 414 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 OR4K3Q96R72 315 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 WRAP53Q9BUR4 548 aaKnown RBP7.81□□□□□ -1.16
CD46-208ENST00000367042 TMED9Q9BVK6 235 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 TTLL2Q9BWV7 592 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 GPATCH2Q9NW75 528 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 PLAGL1Q9UM63 463 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 GSAPA4D1B5 854 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 NEDD8-MDP1E9PL57 170 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 STATHP02808 62 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 SCG5P05408 212 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 C1SP09871 688 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 PRKCAP17252 672 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 RHCEP18577 417 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 APEX1P27695 318 aaKnown RBP7.8□□□□□ -1.16
CD46-208ENST00000367042 BUD31P41223 144 aaPredicted RBP7.8□□□□□ -1.16
CD46-208ENST00000367042 TBPL1P62380 186 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 PSPHP78330 225 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 RAE1P78406 368 aaKnown RBP7.8□□□□□ -1.16
CD46-208ENST00000367042 MLLT1Q03111 559 aaPredicted RBP7.8□□□□□ -1.16
CD46-208ENST00000367042 CNTN1Q12860 1018 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 DOC2BQ14184 412 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 LARS2Q15031 903 aaKnown RBP7.8□□□□□ -1.16
CD46-208ENST00000367042 BTBD16Q32M84 506 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 RNASE12Q5GAN4 147 aaKnown RBP7.8□□□□□ -1.16
CD46-208ENST00000367042 PLEKHS1Q5SXH7 462 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 LCN1P1Q5VSP4 162 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 LHFPL3Q86UP9 236 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 ATCAYQ86WG3 371 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 HOMEZQ8IX15 550 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 SUN5Q8TC36 379 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 SORCS1Q8WY21 1168 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 MRPS31Q92665 395 aaKnown RBP7.8□□□□□ -1.16
CD46-208ENST00000367042 KCTD7Q96MP8 289 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 RNF121Q9H920 327 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 CLEC4AQ9UMR7 237 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 MAPRE3Q9UPY8 281 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 SH3D21A4FU49 640 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 HMX3A6NHT5 357 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 CENPBD1B2RD01 187 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 RNASET2O00584 256 aaKnown RBP7.8□□□□□ -1.16
CD46-208ENST00000367042 NCR1O76036 304 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 H1F0P07305 194 aaKnown RBP7.8□□□□□ -1.16
CD46-208ENST00000367042 ALPPL2P10696 532 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 ZNF8P17098 575 aaPredicted RBP7.8□□□□□ -1.16
CD46-208ENST00000367042 PSMA3P25788 255 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 MAN2A2P49641 1150 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 ZNF79Q15937 498 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 ZNF630Q2M218 657 aaPredicted RBP7.8□□□□□ -1.16
CD46-208ENST00000367042 WSCD2Q2TBF2 565 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 GRHL2Q6ISB3 625 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 REEP3Q6NUK4 255 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 C22orf39Q6P5X5 142 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 ASB18Q6ZVZ8 466 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 ABI3BPQ7Z7G0 1075 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 LSRQ86X29 649 aaPredicted RBP7.8□□□□□ -1.16
CD46-208ENST00000367042 PGBD3Q8N328 593 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 Q8N402 240 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 YIPF7Q8N8F6 280 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 OR7G1Q8NGA0 311 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 ZNF461Q8TAF7 563 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 C2orf15Q8WU43 125 aaKnown RBP7.8□□□□□ -1.16
CD46-208ENST00000367042 SLC7A6Q92536 515 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 SNAPC3Q92966 411 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 REPS1Q96D71 796 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 TMEM169Q96HH4 297 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 TMEM19Q96HH6 336 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 CASD1Q96PB1 797 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 IL17FQ96PD4 163 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 WACQ9BTA9 647 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 FNDC11Q9BVV2 318 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms