RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 CASP3P42574 277 aa3.45□□□□□ -1.86
RNU6-560P-201ENST00000364007 ACTN3Q08043 901 aaPredicted RBP3.45□□□□□ -1.86
RNU6-560P-201ENST00000364007 MFGE8Q08431 387 aaPredicted RBP3.45□□□□□ -1.86
RNU6-560P-201ENST00000364007 RIGQ13278 110 aa3.45□□□□□ -1.86
RNU6-560P-201ENST00000364007 PDE7AQ13946 482 aa3.45□□□□□ -1.86
RNU6-560P-201ENST00000364007 SIX1Q15475 284 aaPredicted RBP3.45□□□□□ -1.86
RNU6-560P-201ENST00000364007 TIPARPQ7Z3E1 657 aaKnown RBP3.45□□□□□ -1.86
RNU6-560P-201ENST00000364007 RPAINQ86UA6 219 aa3.45□□□□□ -1.86
RNU6-560P-201ENST00000364007 FBXW8Q8N3Y1 598 aa3.45□□□□□ -1.86
RNU6-560P-201ENST00000364007 AGPAT1Q99943 283 aa3.45□□□□□ -1.86
RNU6-560P-201ENST00000364007 TRIM7Q9C029 511 aa3.45□□□□□ -1.86
RNU6-560P-201ENST00000364007 DEPPQ9NTK1 212 aa3.45□□□□□ -1.86
RNU6-560P-201ENST00000364007 MAD2L2Q9UI95 211 aa3.45□□□□□ -1.86
RNU6-560P-201ENST00000364007 ZNF346Q9UL40 294 aaKnown RBP3.45□□□□□ -1.86
RNU6-560P-201ENST00000364007 KCNK6Q9Y257 313 aa3.45□□□□□ -1.86
RNU6-560P-201ENST00000364007 STYXL1Q9Y6J8 313 aa3.45□□□□□ -1.86
RNU6-560P-201ENST00000364007 NOTCH3Q9UM47 2321 aa3.45□□□□□ -1.86
RNU6-560P-201ENST00000364007 FGD5Q6ZNL6 1462 aa3.45□□□□□ -1.86
RNU6-560P-201ENST00000364007 TRGV8A0A0C4DH27 118 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 IGLON5A6NGN9 336 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 ZNF724A8MTY0 619 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 NEDD8-MDP1E9PL57 170 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 FBP2O00757 339 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 HPRP00739 348 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 FHP07954 510 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 GATA1P15976 413 aaPredicted RBP3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 PRELPP51888 382 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 RPL27P61353 136 aaKnown RBP3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 SRPXP78539 464 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 FCHO2Q0JRZ9 810 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 TEFQ10587 303 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 LASP1Q14847 261 aaKnown RBP3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 HEPACAMQ14CZ8 416 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 ECSCRQ19T08 205 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 HFEQ30201 348 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 EPC2Q52LR7 807 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 ODF2Q5BJF6 829 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 RNF130Q86XS8 419 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 STHQ8IWL8 128 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 CNTN4Q8IWV2 1026 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 CARNMT1Q8N4J0 409 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 ZNRF1Q8ND25 227 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 C17orf47Q8NEP4 570 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 OR4L1Q8NH43 312 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 FAM222BQ8WU58 562 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 PCNPQ8WW12 178 aaKnown RBP3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 RASL10AQ92737 203 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 MRPL24Q96A35 216 aaKnown RBP3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 MRPL53Q96EL3 112 aaKnown RBP3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 CXorf58Q96LI9 332 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 RCHY1Q96PM5 261 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 STRADBQ9C0K7 418 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 WWP1Q9H0M0 922 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 ADNPQ9H2P0 1102 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 MID1IP1Q9NPA3 183 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 GTSE1Q9NYZ3 720 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 THYN1Q9P016 225 aa3.44□□□□□ -1.86
RNU6-560P-201ENST00000364007 RPL37AP8A6NKH3 93 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 SRRM5B3KS81 715 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 ACADSP16219 412 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 UGT1A6P19224 532 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 CYP3A5P20815 502 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 MTIF2P46199 727 aaKnown RBP3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 GSK3BP49841 420 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 RIDAP52758 137 aaKnown RBP3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 KCNK10P57789 538 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 MSLNQ13421 630 aaPredicted RBP3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 SLC17A1Q14916 467 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 OR1C1Q15619 314 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 STX1AQ16623 288 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 DCAF12Q5T6F0 453 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 CD164L2Q6UWJ8 174 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 SLC47A2Q86VL8 602 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 CATSPER3Q86XQ3 398 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 PHC2Q8IXK0 858 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 LMNTD2Q8IXW0 634 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 BANPQ8N9N5 519 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 SIDT2Q8NBJ9 832 aaKnown RBP3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 RELL2Q8NC24 303 aaPredicted RBP3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 OR6F1Q8NGZ6 308 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 OR4A16Q8NH70 328 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 ANKRD9Q96BM1 317 aaPredicted RBP3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 PRAM1Q96QH2 718 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 RAB40CQ96S21 281 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 S1PR3Q99500 378 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 ATF6BQ99941 703 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 OCR1Q9BZK8 76 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 TSPYL1Q9H0U9 437 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 LIME1Q9H400 295 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 DPEP3Q9H4B8 488 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 MOB1AQ9H8S9 216 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 ZCCHC3Q9NUD5 404 aaKnown RBP3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 DDX28Q9NUL7 540 aaKnown RBP3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 TECRQ9NZ01 308 aaKnown RBP3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 MTRRQ9UBK8 725 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 FOXA2Q9Y261 457 aaPredicted RBP3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 SNX5Q9Y5X3 404 aa3.43□□□□□ -1.86
RNU6-560P-201ENST00000364007 IGKV3D-20A0A0C4DH25 116 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 ACOD1A6NK06 481 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 TMCO5BA8MYB1 307 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms