RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 HTR4Q13639 388 aa5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 BTNL8Q6UX41 500 aa5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 NHLRC1Q6VVB1 395 aa5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 IL17RELQ6ZVW7 336 aa5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 ZNF771Q7L3S4 317 aaPredicted RBP5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 PHLDB2Q86SQ0 1253 aa5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 AMIGO1Q86WK6 493 aa5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 EID3Q8N140 333 aa5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 GPATCH11Q8N954 259 aa5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 LMNTD1Q8N9Z9 388 aa5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 OR52N5Q8NH56 324 aa5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 PYCR2Q96C36 320 aa5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 B3GALT6Q96L58 329 aa5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 ZNF354BQ96LW1 612 aa5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 HNRNPABQ99729 332 aaKnown RBP5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 ZNF577Q9BSK1 485 aa5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 MRPL9Q9BYD2 267 aaKnown RBP5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 PANK2Q9BZ23 570 aa5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 ZMYND12Q9H0C1 365 aa5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 TRPV4Q9HBA0 871 aa5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 FGF21Q9NSA1 209 aa5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 DNAJC17Q9NVM6 304 aaKnown RBP5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 WRAP73Q9P2S5 460 aaPredicted RBP5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 ACAD8Q9UKU7 415 aa5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 TNFRSF18Q9Y5U5 241 aa5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 RALGAPA2Q2PPJ7 1873 aa5.08□□□□□ -1.6
RNU4-39P-201ENST00000362455 IGKV2D-30A0A075B6S6 120 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 LRRD1A4D1F6 860 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 C2orf81A6NN90 581 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 TSHBP01222 138 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 C9P02748 559 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 SERPING1P05155 500 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 ANKRD34CP0C6C1 535 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 IGHV4-38-2P0DP08 117 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 CALM1P0DP23 149 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 CALM2P0DP24 149 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 CALM3P0DP25 149 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 LIFP15018 202 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 HNF4AP41235 474 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 ST8SIA6P61647 398 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 NTHL1P78549 312 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 FOLH1Q04609 750 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 MORF4L2Q15014 288 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 TECRLQ5HYJ1 363 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 CCNYL2Q5T2Q4 361 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 OR4A47Q6IF82 309 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 FAM166AQ6J272 317 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 ZNF843Q8N446 348 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 RFLNBQ8N5W9 214 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 ZNF383Q8NA42 475 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 NOA1Q8NC60 698 aaKnown RBP5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 FGF14Q92915 247 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 CACNG6Q9BXT2 260 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 ZNF350Q9GZX5 532 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 NT5C3AQ9H0P0 336 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 RAB9BQ9NP90 201 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 FAM207AQ9NSI2 230 aaPredicted RBP5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 NRBP2Q9NSY0 501 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 DONSONQ9NYP3 566 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 PIN4Q9Y237 131 aaKnown RBP5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 NLRC5Q86WI3 1866 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 PLXNA4Q9HCM2 1894 aa5.07□□□□□ -1.6
RNU4-39P-201ENST00000362455 CLUHO75153 1309 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 ZZEF1O43149 2961 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 MYH7BA7E2Y1 1941 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 IGLV9-49A0A0B4J1Y8 123 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 ESYT2A0FGR8 921 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 CTDSPLO15194 276 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 CHMP2AO43633 222 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 SLC16A8O95907 504 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 TMOD1P28289 359 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 DCTP40126 519 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 GAS1P54826 345 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 SNU13P55769 128 aaKnown RBP5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 MAZP56270 477 aaKnown RBP5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 STARD6P59095 220 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 ERVFC1-1P60608 527 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 GIT2Q14161 759 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 IQCCQ4KMZ1 466 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 XKR3Q5GH77 459 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 LYSMD4Q5XG99 296 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 TWF2Q6IBS0 349 aaKnown RBP5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 WBP2NLQ6ICG8 309 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 PRSS55Q6UWB4 352 aaPredicted RBP5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 PIGWQ7Z7B1 504 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 ISCA2Q86U28 154 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 ZNF410Q86VK4 478 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 CREBRFQ8IUR6 639 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 CLYBLQ8N0X4 340 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 NAT8LQ8N9F0 302 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 SPC24Q8NBT2 197 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 ZBTB44Q8NCP5 570 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 SGF29Q96ES7 293 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 PGM2Q96G03 612 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 AK8Q96MA6 479 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 RIT2Q99578 217 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 TMEM175Q9BSA9 504 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 TRMT61BQ9BVS5 477 aaKnown RBP5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 GCOM2Q9BZD3 368 aaPredicted RBP5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 CXCL16Q9H2A7 254 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms