RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 TMEM181Q9P2C4 612 aa17.03■□□□□ 0.32
CCDC7-203ENST00000362006 ENTPD4Q9Y227 616 aa17.03■□□□□ 0.32
CCDC7-203ENST00000362006 MRPS33Q9Y291 106 aaKnown RBP17.03■□□□□ 0.32
CCDC7-203ENST00000362006 RRP15Q9Y3B9 282 aaKnown RBP17.03■□□□□ 0.32
CCDC7-203ENST00000362006 ZNF780BQ9Y6R6 833 aa17.03■□□□□ 0.32
CCDC7-203ENST00000362006 MUC6Q6W4X9 2439 aa17.02■□□□□ 0.32
CCDC7-203ENST00000362006 PGRMC2O15173 223 aa17.02■□□□□ 0.32
CCDC7-203ENST00000362006 MED26O95402 600 aa17.02■□□□□ 0.32
CCDC7-203ENST00000362006 CPSF4O95639 269 aaKnown RBP17.02■□□□□ 0.32
CCDC7-203ENST00000362006 SLC6A2P23975 617 aa17.02■□□□□ 0.32
CCDC7-203ENST00000362006 PCBP4P57723 403 aaKnown RBP17.02■□□□□ 0.32
CCDC7-203ENST00000362006 OLR1P78380 273 aa17.02■□□□□ 0.32
CCDC7-203ENST00000362006 PLIN5Q00G26 463 aa17.02■□□□□ 0.32
CCDC7-203ENST00000362006 TRIP6Q15654 476 aaKnown RBP17.02■□□□□ 0.32
CCDC7-203ENST00000362006 MPEG1Q2M385 716 aa17.02■□□□□ 0.32
CCDC7-203ENST00000362006 NANOGP8Q6NSW7 305 aa17.02■□□□□ 0.32
CCDC7-203ENST00000362006 TRIML2Q8N7C3 387 aa17.02■□□□□ 0.32
CCDC7-203ENST00000362006 DNAJB14Q8TBM8 379 aa17.02■□□□□ 0.32
CCDC7-203ENST00000362006 MIEF2Q96C03 454 aa17.02■□□□□ 0.32
CCDC7-203ENST00000362006 ANKRD27Q96NW4 1050 aa17.02■□□□□ 0.32
CCDC7-203ENST00000362006 NANOGQ9H9S0 305 aa17.02■□□□□ 0.32
CCDC7-203ENST00000362006 ADA2Q9NZK5 511 aa17.02■□□□□ 0.32
CCDC7-203ENST00000362006 ABCD2Q9UBJ2 740 aa17.02■□□□□ 0.32
CCDC7-203ENST00000362006 ZNF282Q9UDV7 671 aaPredicted RBP17.02■□□□□ 0.32
CCDC7-203ENST00000362006 VPS4AQ9UN37 437 aa17.02■□□□□ 0.32
CCDC7-203ENST00000362006 L3MBTL1Q9Y468 752 aa17.02■□□□□ 0.32
CCDC7-203ENST00000362006 CYR61O00622 381 aa17.02■□□□□ 0.31
CCDC7-203ENST00000362006 ALAS2P22557 587 aa17.02■□□□□ 0.31
CCDC7-203ENST00000362006 PPP2R1BP30154 601 aa17.02■□□□□ 0.31
CCDC7-203ENST00000362006 MANFP55145 182 aaKnown RBP17.02■□□□□ 0.31
CCDC7-203ENST00000362006 CAPRIN1Q14444 709 aaKnown RBP17.02■□□□□ 0.31
CCDC7-203ENST00000362006 SAMD4BQ5PRF9 694 aaKnown RBP17.02■□□□□ 0.31
CCDC7-203ENST00000362006 PGM2L1Q6PCE3 622 aa17.02■□□□□ 0.31
CCDC7-203ENST00000362006 B3GNT8Q7Z7M8 397 aa17.02■□□□□ 0.31
CCDC7-203ENST00000362006 PPP1R3BQ86XI6 285 aa17.02■□□□□ 0.31
CCDC7-203ENST00000362006 KIAA2013Q8IYS2 634 aa17.02■□□□□ 0.31
CCDC7-203ENST00000362006 CLECL1Q8IZS7 167 aa17.02■□□□□ 0.31
CCDC7-203ENST00000362006 FBXW8Q8N3Y1 598 aa17.02■□□□□ 0.31
CCDC7-203ENST00000362006 OR5T3Q8NGG3 340 aa17.02■□□□□ 0.31
CCDC7-203ENST00000362006 OR4A15Q8NGL6 344 aa17.02■□□□□ 0.31
CCDC7-203ENST00000362006 CIDECQ96AQ7 238 aaPredicted RBP17.02■□□□□ 0.31
CCDC7-203ENST00000362006 BBS4Q96RK4 519 aa17.02■□□□□ 0.31
CCDC7-203ENST00000362006 INPP5KQ9BT40 448 aa17.02■□□□□ 0.31
CCDC7-203ENST00000362006 SLC7A5P2Q9GIP4 190 aa17.02■□□□□ 0.31
CCDC7-203ENST00000362006 TAS2R9Q9NYW1 312 aa17.02■□□□□ 0.31
CCDC7-203ENST00000362006 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.02■□□□□ 0.31
CCDC7-203ENST00000362006 NDOR1Q9UHB4 597 aa17.02■□□□□ 0.31
CCDC7-203ENST00000362006 PCDHB3Q9Y5E6 796 aa17.02■□□□□ 0.31
CCDC7-203ENST00000362006 PCDHB14Q9Y5E9 798 aa17.02■□□□□ 0.31
CCDC7-203ENST00000362006 TRBV5-3A0A0A0MS03 114 aa17.01■□□□□ 0.31
CCDC7-203ENST00000362006 A0A1B0GX78 115 aa17.01■□□□□ 0.31
CCDC7-203ENST00000362006 MYO1GB0I1T2 1018 aa17.01■□□□□ 0.31
CCDC7-203ENST00000362006 FGF5P12034 268 aa17.01■□□□□ 0.31
CCDC7-203ENST00000362006 CSNK2A2P19784 350 aaPredicted RBP17.01■□□□□ 0.31
CCDC7-203ENST00000362006 IL10P22301 178 aa17.01■□□□□ 0.31
CCDC7-203ENST00000362006 PPIBP23284 216 aaKnown RBP17.01■□□□□ 0.31
CCDC7-203ENST00000362006 C16orf72Q14CZ0 275 aa17.01■□□□□ 0.31
CCDC7-203ENST00000362006 CEBPEQ15744 281 aa17.01■□□□□ 0.31
CCDC7-203ENST00000362006 PRSS53Q2L4Q9 553 aa17.01■□□□□ 0.31
CCDC7-203ENST00000362006 RUNDC3AQ59EK9 446 aa17.01■□□□□ 0.31
CCDC7-203ENST00000362006 RHBDD2Q6NTF9 364 aa17.01■□□□□ 0.31
CCDC7-203ENST00000362006 ZNF621Q6ZSS3 439 aa17.01■□□□□ 0.31
CCDC7-203ENST00000362006 ULK2Q8IYT8 1036 aa17.01■□□□□ 0.31
CCDC7-203ENST00000362006 OR4K14Q8NGD5 310 aa17.01■□□□□ 0.31
CCDC7-203ENST00000362006 UTP4Q969X6 686 aaKnown RBP17.01■□□□□ 0.31
CCDC7-203ENST00000362006 CMKLR1Q99788 373 aa17.01■□□□□ 0.31
CCDC7-203ENST00000362006 SLC39A3Q9BRY0 314 aa17.01■□□□□ 0.31
CCDC7-203ENST00000362006 NEUROD4Q9HD90 331 aa17.01■□□□□ 0.31
CCDC7-203ENST00000362006 FBXO8Q9NRD0 319 aa17.01■□□□□ 0.31
CCDC7-203ENST00000362006 VAPAQ9P0L0 249 aa17.01■□□□□ 0.31
CCDC7-203ENST00000362006 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.01■□□□□ 0.31
CCDC7-203ENST00000362006 GLOD5A6NK44 160 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 EFCAB7A8K855 629 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 DLL1O00548 723 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 NVLO15381 856 aaKnown RBP17■□□□□ 0.31
CCDC7-203ENST00000362006 DNAJA2O60884 412 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 DNAJB6O75190 326 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 ERAL1O75616 437 aaKnown RBP17■□□□□ 0.31
CCDC7-203ENST00000362006 C6orf47O95873 294 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 HOXB9P17482 250 aaPredicted RBP17■□□□□ 0.31
CCDC7-203ENST00000362006 PTPN6P29350 595 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 MPIP34949 423 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 SLC7A2P52569 658 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 PDX1P52945 283 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 SHC2P98077 582 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 MC2RQ01718 297 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 CDCP2Q5VXM1 449 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 MED25Q71SY5 747 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 TMEM126BQ8IUX1 230 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 SLC15A3Q8IY34 581 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 C7orf57Q8NEG2 295 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 OCIAD1Q9NX40 245 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 C5AR2Q9P296 337 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 GMEB1Q9Y692 573 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 B4E171 279 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 CLDN4O14493 209 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 TSPAN7P41732 249 aa17■□□□□ 0.31
CCDC7-203ENST00000362006 EEFSECP57772 596 aaKnown RBP17■□□□□ 0.31
CCDC7-203ENST00000362006 INSM1Q01101 510 aaPredicted RBP17■□□□□ 0.31
CCDC7-203ENST00000362006 LARP7Q4G0J3 582 aaKnown RBP eCLIP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms