RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 RELTQ969Z4 430 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 SECISBP2Q96T21 854 aaKnown RBP12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 ACBD6Q9BR61 282 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 GPATCH2Q9NW75 528 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 CASC3O15234 703 aaKnown RBP12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 CFIP05156 583 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 RHOP08100 348 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 OR8U9P0C7N5 309 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 SSX9Q7RTT3 188 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 GPR142Q7Z601 462 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 LRRTM4Q86VH4 590 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 XYLT1Q86Y38 959 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 KIAA0319LQ8IZA0 1049 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 BOLLQ8N9W6 283 aaKnown RBP12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 OR6N1Q8NGY5 312 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 OR5AK3PQ8NH89 298 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 NFKBIDQ8NI38 313 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 ZNF696Q9H7X3 374 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 PHYHO14832 338 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 PCDH7O60245 1069 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 BCHEP06276 602 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 IMPDH1P20839 514 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 TPGS2Q68CL5 300 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 NOXRED1Q6NXP6 359 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 TCEANCQ8N8B7 351 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 ZNF599Q96NL3 588 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 SAMD10Q9BYL1 202 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 OR51I1Q9H343 314 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 KCNS2Q9ULS6 477 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 PREX1Q8TCU6 1659 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 EDDM13A0A1B0GTR0 161 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 ANKRD28O15084 1053 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 MATN3O15232 486 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 NFATC4Q14934 902 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 DEFB115Q30KQ5 88 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 HES5Q5TA89 166 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 TRMT10BQ6PF06 316 aaKnown RBP12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 VSIG10LQ86VR7 867 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 ZCCHC10Q8TBK6 192 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 SLC25A36Q96CQ1 311 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 FUBP3Q96I24 572 aaKnown RBP eCLIP12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 TWNKQ96RR1 684 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 OPA3Q9H6K4 179 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 NLKQ9UBE8 527 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 CNOT11Q9UKZ1 510 aaKnown RBP12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 A0A1W2PRB8 838 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 RAB19A4D1S5 217 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 OTOL1A6NHN0 477 aaPredicted RBP12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 K7EPK0 472 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 SLC7A4O43246 635 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 PTP4A2Q12974 167 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 ARHGAP40Q5TG30 622 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 MEDAGQ5VYS4 303 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 ZNF572Q7Z3I7 529 aaPredicted RBP12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 FAM71E2Q8N5Q1 922 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 ATRNO75882 1429 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 CCL22O00626 93 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 FMO6PO60774 539 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 BCAS1O75363 584 aaPredicted RBP12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 LRCH4O75427 683 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 LSSP48449 732 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 BMXP51813 675 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 SLC18A1P54219 525 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 TAF10Q12962 218 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 SLC2A7Q6PXP3 512 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 CCDC71LQ8N9Z2 235 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 OR56B2PQ8NGI1 322 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 GLYATL1Q969I3 302 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 ZNF578Q96N58 590 aaPredicted RBP12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 MRPL15Q9P015 296 aaKnown RBP12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 ABRACLQ9P1F3 81 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 CBY1Q9Y3M2 126 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 CA12O43570 354 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 ZNF425Q6IV72 752 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 LCLAT1Q6UWP7 414 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 WDR53Q7Z5U6 358 aaPredicted RBP12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 YIPF4Q9BSR8 244 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 VPS29Q9UBQ0 182 aa12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 ZFR2Q9UPR6 939 aaKnown RBP12.73□□□□□ -0.37
SRGAP3-201ENST00000360413 TMEM185AQ8NFB2 350 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 ZUFSPQ96AP4 578 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 ZNF416Q9BWM5 594 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 PPP4R1LQ9P1A2 415 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 STUB1Q9UNE7 303 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 A0A0U1RQK1 487 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 WNT10BO00744 389 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 KCNJ13O60928 360 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 ADH1BP00325 375 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 CD48P09326 243 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 CELP19835 753 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 FAM122CQ6P4D5 195 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 KDELC1Q6UW63 502 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 ZNF611Q8N823 705 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 CNOT9Q92600 299 aaKnown RBP12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 GTF2H4Q92759 462 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 GXYLT2A0PJZ3 443 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 GPR37L1O60883 481 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 PSMD10O75832 226 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 UPK1BO75841 260 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 ALDOAP04075 364 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms