RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 RPS6KA2Q15349 733 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 NKG7Q16617 165 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 VWA2Q5GFL6 755 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 GKAP1Q5VSY0 366 aaPredicted RBP11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 MLIPQ5VWP3 458 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 ZC3H7AQ8IWR0 971 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 TMEM132CQ8N3T6 1108 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 CPSF7Q8N684 471 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 ANKS4BQ8N8V4 417 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 TMEM52Q8NDY8 209 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 CLHC1Q8NHS4 586 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 STT3BQ8TCJ2 826 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 BCAS4Q8TDM0 211 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 NKD1Q969G9 470 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 MARK4Q96L34 752 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 FAM117AQ9C073 453 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 REEP4Q9H6H4 257 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 RPF2Q9H7B2 306 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 WDR54Q9H977 334 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 TAS2R7Q9NYW3 318 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 EHD3Q9NZN3 535 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 ZIM2Q9NZV7 527 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 CTSFQ9UBX1 484 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 CES1P1Q9UKY3 287 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 COPG1Q9Y678 874 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 WASHC1A8K0Z3 465 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 C9J4A7 227 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 TERTO14746 1132 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 PGRMC2O15173 223 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 TBX19O60806 448 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 JRKO75564 520 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 FURINP09958 794 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 ZGLP1P0C6A0 271 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 NR2F6P10588 404 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 NCF2P19878 526 aaPredicted RBP11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 TCN2P20062 427 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 DDCP20711 480 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 GPX3P22352 226 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 STAT5AP42229 794 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 HNRNPFP52597 415 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 UFM1P61960 85 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 CBX1P83916 185 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 ERV3-1Q14264 604 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 NCF4Q15080 339 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 TBC1D25Q3MII6 688 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 LAPTM4BQ86VI4 370 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 ZNF595Q8IYB9 648 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 MMP21Q8N119 569 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 MIER2Q8N344 545 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 FAM47BQ8NA70 645 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 DNAJB14Q8TBM8 379 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 CT55Q8WUE5 264 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 TANKQ92844 425 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 MIEF2Q96C03 454 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 MTERF3Q96E29 417 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 ZNF764Q96H86 408 aaPredicted RBP11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 TEX37Q96LM6 180 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 SPSB2Q99619 263 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 DPY30Q9C005 99 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 WDR41Q9HAD4 459 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 SAR1AQ9NR31 198 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 C14orf105Q9NVL8 296 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 TMEM45AQ9NWC5 275 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 GPN3Q9UHW5 284 aaPredicted RBP11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 ATP6V1HQ9UI12 483 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 METRNQ9UJH8 293 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 MAPRE3Q9UPY8 281 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 MRPS33Q9Y291 106 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 ANKRD11Q6UB99 2663 aaPredicted RBP11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 SCN2AQ99250 2005 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 GABRR3A8MPY1 467 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 CLDN4O14493 209 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 NDUFAB1O14561 156 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 AKAP10O43572 662 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 CCDC22O60826 627 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 B4GALT2O60909 372 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 CTNSO60931 367 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 PRKRAO75569 313 aaKnown RBP11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 KLF7O75840 302 aaPredicted RBP11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 LRATO95237 230 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 RECKO95980 971 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 LIPCP11150 499 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 JAK1P23458 1154 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 RPL3P39023 403 aaKnown RBP11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 HSD17B7P56937 341 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 PDE7AQ13946 482 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 SQLEQ14534 574 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 SLC48A1Q6P1K1 146 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 C19orf48Q6RUI8 117 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 R3HCC1LQ7Z5L2 792 aaKnown RBP11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 CACNA2D3Q8IZS8 1091 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 KRTCAP2Q8N6L1 136 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 PLPP5Q8NEB5 264 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 CDC26Q8NHZ8 85 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 GFM2Q969S9 779 aaKnown RBP11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 COQ8BQ96D53 544 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 GPR87Q9BY21 358 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 MRGBPQ9NV56 204 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 NXT1Q9UKK6 140 aaKnown RBP11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 MMACHCQ9Y4U1 282 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms