RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 TBL1XR1Q9BZK7 514 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 TREM1Q9NP99 234 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 PCDH10Q9P2E7 1040 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 DLGAP4Q9Y2H0 992 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 DNMT3AQ9Y6K1 912 aaPredicted RBP11.74□□□□□ -0.53
DNMT1-202ENST00000359526 INMT-MINDY4F8WBC2 141 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 YKT6O15498 198 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 LCN1P31025 176 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 ACTR1BP42025 376 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 ZNF81P51508 661 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 OR12D2P58182 307 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 ACTR1AP61163 376 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 SLC10A2Q12908 348 aaPredicted RBP11.74□□□□□ -0.53
DNMT1-202ENST00000359526 RCAN2Q14206 197 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 SPRED3Q2MJR0 410 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 SUN3Q8TAQ9 357 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 NKD1Q969G9 470 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 MYRFLQ96LU7 910 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 CARS2Q9HA77 564 aaKnown RBP11.74□□□□□ -0.53
DNMT1-202ENST00000359526 SMURF1Q9HCE7 757 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 DNAJC27Q9NZQ0 273 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 MAGED1Q9Y5V3 778 aaPredicted RBP11.74□□□□□ -0.53
DNMT1-202ENST00000359526 FLRT2O43155 660 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 HCRTO43612 131 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 MAFKO60675 156 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 MTX2O75431 263 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 HTR2BP41595 481 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 RPS3AP61247 264 aaKnown RBP11.74□□□□□ -0.53
DNMT1-202ENST00000359526 SEMG2Q02383 582 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 PDSS1Q5T2R2 415 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 B3GNT9Q6UX72 402 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 Q6ZVU0 165 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 ERN2Q76MJ5 926 aaKnown RBP11.74□□□□□ -0.53
DNMT1-202ENST00000359526 KLHDC9Q8NEP7 349 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 OR8J1Q8NGP2 316 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 CPNE2Q96FN4 548 aaPredicted RBP11.74□□□□□ -0.53
DNMT1-202ENST00000359526 B3GNT4Q9C0J1 378 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 EBF1Q9UH73 591 aa11.74□□□□□ -0.53
DNMT1-202ENST00000359526 GRXCR2A6NFK2 248 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 DISC1C4P0D8 188 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 PRKYO43930 277 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 RFPL2O75678 378 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 HTR1AP08908 422 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 GGT1P19440 569 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 NPR2P20594 1047 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 NKX2-5P52952 324 aaPredicted RBP11.73□□□□□ -0.53
DNMT1-202ENST00000359526 HNRNPA0Q13151 305 aaKnown RBP11.73□□□□□ -0.53
DNMT1-202ENST00000359526 C14orf80Q86SX3 495 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 CEP97Q8IW35 865 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 RFT1Q96AA3 541 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 LGALS12Q96DT0 336 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 TTYH2Q9BSA4 534 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 ACTR6Q9GZN1 396 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 OR51B5Q9H339 312 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 RANBP3Q9H6Z4 567 aaPredicted RBP11.73□□□□□ -0.53
DNMT1-202ENST00000359526 EDARQ9UNE0 448 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 A0A0G2JN53 185 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 M0R233 179 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 SCDO00767 359 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 JUPP14923 745 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 ACRV1P26436 265 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 TIA1P31483 386 aaKnown RBP eCLIP11.73□□□□□ -0.536e-7■■■■□ 22.6
DNMT1-202ENST00000359526 ACTC1P68032 377 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 ACTA1P68133 377 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 DUS1LQ6P1R4 473 aaKnown RBP11.73□□□□□ -0.53
DNMT1-202ENST00000359526 GHDCQ8N2G8 530 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 ZSCAN1Q8NBB4 408 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 KLHDC7BQ96G42 594 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.73□□□□□ -0.53
DNMT1-202ENST00000359526 NUDT15Q9NV35 164 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 ERVK-18Q9QC07 812 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 SH3D21A4FU49 640 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 DBIP07108 87 aaKnown RBP11.73□□□□□ -0.53
DNMT1-202ENST00000359526 BCKDHAP12694 445 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 CSF2RAP15509 400 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 GGT5P36269 586 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 CSNK1DP48730 415 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 SEC13P55735 322 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 CLDN8P56748 225 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 MC1RQ01726 317 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 ARFRP1Q13795 201 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 GK3PQ14409 553 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 GINS1Q14691 196 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 CCBE1Q6UXH8 406 aaPredicted RBP11.73□□□□□ -0.53
DNMT1-202ENST00000359526 GRASPQ7Z6J2 395 aaPredicted RBP11.73□□□□□ -0.53
DNMT1-202ENST00000359526 SLC22A15Q8IZD6 547 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 CNIH3Q8TBE1 160 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 TAS2R10Q9NYW0 307 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 FAM72CH0Y354 149 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 LAMTOR5O43504 91 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 RHCEP18577 417 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.73□□□□□ -0.531e-9■■□□□ 11.8
DNMT1-202ENST00000359526 FAM72AQ5TYM5 149 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 FAM72DQ6L9T8 149 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 SLC27A4Q6P1M0 643 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 FAM72BQ86X60 149 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 SHKBP1Q8TBC3 707 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 HERPUD2Q9BSE4 406 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 ANKRD60Q9BZ19 345 aa11.73□□□□□ -0.53
DNMT1-202ENST00000359526 LIPT1Q9Y234 373 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms