RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 ZNF431Q8TF32 576 aaPredicted RBP13.16□□□□□ -0.3
VCP-201ENST00000358901 ITFG2Q969R8 447 aa13.16□□□□□ -0.3
VCP-201ENST00000358901 ABCG4Q9H172 646 aa13.16□□□□□ -0.3
VCP-201ENST00000358901 SMURF1Q9HCE7 757 aa13.16□□□□□ -0.3
VCP-201ENST00000358901 FAIMQ9NVQ4 179 aa13.16□□□□□ -0.3
VCP-201ENST00000358901 GNG8Q9UK08 70 aa13.16□□□□□ -0.3
VCP-201ENST00000358901 PCDHGA8Q9Y5G5 932 aa13.16□□□□□ -0.3
VCP-201ENST00000358901 BRWD1Q9NSI6 2320 aa13.16□□□□□ -0.3
VCP-201ENST00000358901 KIAA0100Q14667 2235 aaKnown RBP13.16□□□□□ -0.3
VCP-201ENST00000358901 CXCR1P25024 350 aa13.16□□□□□ -0.3
VCP-201ENST00000358901 PRMT2P55345 433 aa13.16□□□□□ -0.3
VCP-201ENST00000358901 LDLRAD1Q5T700 205 aa13.16□□□□□ -0.3
VCP-201ENST00000358901 DCP2Q8IU60 420 aaKnown RBP13.16□□□□□ -0.3
VCP-201ENST00000358901 GPR150Q8NGU9 434 aa13.16□□□□□ -0.3
VCP-201ENST00000358901 KCNK12Q9HB15 430 aa13.16□□□□□ -0.3
VCP-201ENST00000358901 Q9N2J8 555 aa13.16□□□□□ -0.3
VCP-201ENST00000358901 FUOMA2VDF0 154 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 TNFRSF10BO14763 440 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 ALDOCP09972 364 aaKnown RBP13.15□□□□□ -0.3
VCP-201ENST00000358901 STOMP27105 288 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 CNR2P34972 360 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 ZNF181Q2M3W8 571 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 PAQR9Q6ZVX9 377 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 NAGSQ8N159 534 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 HMGB4Q8WW32 186 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 ATOH8Q96SQ7 321 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 SLAMF8Q9P0V8 285 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 A0A1B0GVT2 93 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 C7orf72A4D263 438 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 ARSAP15289 507 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 FSHRP23945 695 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 CD70P32970 193 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 BLKP51451 505 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 GTF2IRD2BQ6EKJ0 949 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 CRTC1Q6UUV9 634 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 COMMD6Q7Z4G1 85 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 GTF2IRD2Q86UP8 949 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 RETREG3Q86VR2 466 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 FAM217AQ8IXS0 508 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 SDR16C5Q8N3Y7 309 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 MFSD2AQ8NA29 543 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 TMEM246Q9BRR3 403 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 PNO1Q9NRX1 252 aaKnown RBP13.15□□□□□ -0.3
VCP-201ENST00000358901 TAS2R10Q9NYW0 307 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 SARDHQ9UL12 918 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 FXYD6-FXYD2A0A087WZ82 144 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 NOTOA8MTQ0 251 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 E7EQ34 232 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 SCAMP2O15127 329 aaKnown RBP13.15□□□□□ -0.3
VCP-201ENST00000358901 RFPL2O75678 378 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 PORP16435 677 aaPredicted RBP13.15□□□□□ -0.3
VCP-201ENST00000358901 CBX5P45973 191 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 GCGRP47871 477 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 ZNF782Q6ZMW2 699 aaPredicted RBP13.15□□□□□ -0.3
VCP-201ENST00000358901 CNTN4Q8IWV2 1026 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 Q8N402 240 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 MDGA1Q8NFP4 955 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 MZB1Q8WU39 189 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 DNAJA4Q8WW22 397 aaPredicted RBP13.15□□□□□ -0.3
VCP-201ENST00000358901 ZBED3Q96IU2 234 aaPredicted RBP13.15□□□□□ -0.3
VCP-201ENST00000358901 SLC12A9Q9BXP2 914 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 FXYD6Q9H0Q3 95 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 C14orf105Q9NVL8 296 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 MAU2Q9Y6X3 613 aa13.15□□□□□ -0.3
VCP-201ENST00000358901 FLRT2O43155 660 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 SLC5A2P31639 672 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 GRSF1Q12849 480 aaKnown RBP eCLIP13.14□□□□□ -0.31
VCP-201ENST00000358901 AMZ1Q400G9 498 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 FBXO42Q6P3S6 717 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 ARMCX6Q7L4S7 300 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 SPARTQ8N0X7 666 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 LILRA2Q8N149 483 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 OR2L5Q8NG80 312 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 GNPDA2Q8TDQ7 276 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 THEM6Q8WUY1 208 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 GMPR2Q9P2T1 348 aaKnown RBP13.14□□□□□ -0.31
VCP-201ENST00000358901 ZNF69Q9UC07 566 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 NAV1Q8NEY1 1877 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 PHLPP1O60346 1717 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 A0A1W2PPK0 400 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 C5orf51A6NDU8 294 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 TTC34A8MYJ7 566 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 B4DGG1 531 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 TEX28O15482 410 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 SMAD6O43541 496 aaKnown RBP13.14□□□□□ -0.31
VCP-201ENST00000358901 MAP2K3P46734 347 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 OR3A3P47888 321 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 OR3A2P47893 321 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 CD97P48960 835 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 NKX2-5P52952 324 aaPredicted RBP13.14□□□□□ -0.31
VCP-201ENST00000358901 GPM6BQ13491 265 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 ARFRP1Q13795 201 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 NFE2L1Q14494 772 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 PLEKHG7Q6ZR37 379 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 ERN2Q76MJ5 926 aaKnown RBP13.14□□□□□ -0.31
VCP-201ENST00000358901 ASCC1Q8N9N2 400 aaKnown RBP13.14□□□□□ -0.31
VCP-201ENST00000358901 OR4K14Q8NGD5 310 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 BBS10Q8TAM1 723 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 DGAT2Q96PD7 388 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 HDHD5Q9BXW7 423 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms