RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 RAB8BQ92930 207 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 PIP5K1AQ99755 562 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 MROQ9BYG7 248 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 COL3A1P02461 1466 aaPredicted RBP14.32□□□□□ -0.12
LMX1B-201ENST00000355497 LDB2O43679 373 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 DLDP09622 509 aaKnown RBP14.32□□□□□ -0.12
LMX1B-201ENST00000355497 ZNF182P17025 639 aaPredicted RBP14.32□□□□□ -0.12
LMX1B-201ENST00000355497 FAPQ12884 760 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 FADDQ13158 208 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 C22orf39Q6P5X5 142 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 DBF4BQ8NFT6 615 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.32□□□□□ -0.12
LMX1B-201ENST00000355497 OR8D2Q9GZM6 311 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 CLEC4EQ9ULY5 219 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 ERVK-19Q9WJR5 959 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 TEX264Q9Y6I9 313 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 PCDH17O14917 1159 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 ACRP10323 421 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 CKMT1AP12532 417 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 CRISP1P54107 249 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 MLC1Q15049 377 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 RPS27LQ71UM5 84 aaKnown RBP14.32□□□□□ -0.12
LMX1B-201ENST00000355497 PM20D2Q8IYS1 436 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 HS3ST5Q8IZT8 346 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 ZNF516Q92618 1163 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 PEX13Q92968 403 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 C17orf62Q9BQA9 187 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 NSUN3Q9H649 340 aaKnown RBP14.32□□□□□ -0.12
LMX1B-201ENST00000355497 KCTD3Q9Y597 815 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 DNMT3AQ9Y6K1 912 aaPredicted RBP14.32□□□□□ -0.12
LMX1B-201ENST00000355497 MAP2P11137 1827 aaKnown RBP14.32□□□□□ -0.12
LMX1B-201ENST00000355497 CELP19835 753 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 MAGEA3P43357 314 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 EXOC3L2Q2M3D2 409 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 PLEKHS1Q5SXH7 462 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 ATAD3CQ5T2N8 411 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 ATG9BQ674R7 924 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 SUSD1Q6UWL2 747 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 ARHGAP12Q8IWW6 846 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 MAPK15Q8TD08 544 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 PBDC1Q9BVG4 233 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 OR2B2Q9GZK3 357 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 MTG2Q9H4K7 406 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 XPNPEP1Q9NQW7 623 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 C14orf119Q9NWQ9 140 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 MKS1Q9NXB0 559 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 COPZ2Q9P299 210 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 AP1M2Q9Y6Q5 423 aa14.32□□□□□ -0.12
LMX1B-201ENST00000355497 RASAL1O95294 804 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 ADH1BP00325 375 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 PROKR1Q8TCW9 393 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 OR5P2Q8WZ92 322 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 LIN37Q96GY3 246 aaPredicted RBP14.31□□□□□ -0.12
LMX1B-201ENST00000355497 TMEM246Q9BRR3 403 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 POTEKPQ9BYX7 375 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 ZNF225Q9UK10 706 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 ICKQ9UPZ9 632 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 A0A096LPI6 279 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 GLOD5A6NK44 160 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 ZNF850A8MQ14 1090 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 H3BUI4 141 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 OR12D1P0DN82 309 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 DNASE1P24855 282 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 HK3P52790 923 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 SLC25A11Q02978 314 aaKnown RBP14.31□□□□□ -0.12
LMX1B-201ENST00000355497 PRTFDC1Q9NRG1 225 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 SARDHQ9UL12 918 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 PCDHGA8Q9Y5G5 932 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 FAM189A1O60320 539 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 INHAP05111 366 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 ERCC1P07992 297 aaPredicted RBP14.31□□□□□ -0.12
LMX1B-201ENST00000355497 AGTR1P30556 359 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 GRXCR2A6NFK2 248 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 C12orf71A8MTZ7 269 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 BEST3Q8N1M1 668 aa14.31□□□□□ -0.12
LMX1B-201ENST00000355497 NTPCRQ9BSD7 190 aaKnown RBP14.31□□□□□ -0.12
LMX1B-201ENST00000355497 PAK1IP1Q9NWT1 392 aaPredicted RBP14.31□□□□□ -0.12
LMX1B-201ENST00000355497 PLSCR1O15162 318 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 DNAJB5O75953 348 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 OXTRP30559 389 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 GALNT2Q10471 571 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 GPRC6AQ5T6X5 926 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 LIPJQ5W064 366 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 GPR139Q6DWJ6 353 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 TMPRSS12Q86WS5 348 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 MUS81Q96NY9 551 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 TMEM248Q9NWD8 314 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 PCDHGA2Q9Y5H1 932 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 MAGED1Q9Y5V3 778 aaPredicted RBP14.3□□□□□ -0.12
LMX1B-201ENST00000355497 OR6C6A6NF89 314 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 DIRAS3O95661 229 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 FAM163BP0C2L3 166 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 CAPN3P20807 821 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 SHMT2P34897 504 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 KCNQ1P51787 676 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 ACTA2P62736 377 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 ACTG2P63267 376 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 NCCRP1Q6ZVX7 275 aaPredicted RBP14.3□□□□□ -0.12
LMX1B-201ENST00000355497 METTL25Q8N6Q8 603 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 OR4K1Q8NGD4 311 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms