RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 CCNB1IP1Q9NPC3 277 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 ASB6Q9NWX5 421 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 GRHPRQ9UBQ7 328 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 KCND3Q9UK17 655 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 PADI1Q9ULC6 663 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 C11orf98E9PRG8 122 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 ZNF3P17036 446 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 PRLHRP49683 370 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 CLRN1P58418 232 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 SPEM2Q0P670 501 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 MRPL49Q13405 166 aaKnown RBP9.28□□□□□ -0.92
GABPA-201ENST00000354828 PCLAFQ15004 111 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 RSBN1Q5VWQ0 802 aaPredicted RBP9.28□□□□□ -0.92
GABPA-201ENST00000354828 CCSAPQ6IQ19 270 aaPredicted RBP9.28□□□□□ -0.92
GABPA-201ENST00000354828 LCTLQ6UWM7 567 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 Q6ZS52 159 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 PARP8Q8N3A8 854 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 CAPSLQ8WWF8 208 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 NAA11Q9BSU3 229 aaPredicted RBP9.28□□□□□ -0.92
GABPA-201ENST00000354828 SMURF2Q9HAU4 748 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 C14orf105Q9NVL8 296 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 IFT52Q9Y366 437 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 LAMB1P07942 1786 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 VSTM2BA6NLU5 285 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 PRAMEF2O60811 474 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 HMGN1P05114 100 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 CAPZA1P52907 286 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 LSM3P62310 102 aaKnown RBP9.28□□□□□ -0.92
GABPA-201ENST00000354828 SLC18A2Q05940 514 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 PTGR1Q14914 329 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 C5orf22Q49AR2 442 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 SPANXN2Q5MJ10 180 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 NDUFAF5Q5TEU4 345 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 AP1ARQ63HQ0 302 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 RBM44Q6ZP01 1051 aaKnown RBP9.28□□□□□ -0.92
GABPA-201ENST00000354828 TEX19Q8NA77 164 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 OR5T3Q8NGG3 340 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 TCTN2Q96GX1 697 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 BATF3Q9NR55 127 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 CLEC4EQ9ULY5 219 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 NAALAD2Q9Y3Q0 740 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 EIF1AYO14602 144 aaKnown RBP9.28□□□□□ -0.92
GABPA-201ENST00000354828 PGRMC2O15173 223 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 SLC22A2O15244 555 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 IFI30P13284 250 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 ACPPP15309 386 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 MNDAP41218 407 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 ZNF140P52738 457 aaPredicted RBP9.28□□□□□ -0.92
GABPA-201ENST00000354828 RINLQ6ZS11 566 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 PQLC1Q8N2U9 271 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 OR52B6Q8NGF0 335 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 MRGPRX1Q96LB2 322 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 PRRX2Q99811 253 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 DCUN1D5Q9BTE7 237 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 DOHHQ9BU89 302 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 CHID1Q9BWS9 393 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 FGF21Q9NSA1 209 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 PCDHGB7Q9Y5F8 929 aa9.28□□□□□ -0.92
GABPA-201ENST00000354828 LOC285095A0A1B0GVY8 99 aa9.27□□□□□ -0.92
GABPA-201ENST00000354828 CD46P15529 392 aa9.27□□□□□ -0.92
GABPA-201ENST00000354828 MMP12P39900 470 aa9.27□□□□□ -0.92
GABPA-201ENST00000354828 OR1D5P58170 312 aa9.27□□□□□ -0.92
GABPA-201ENST00000354828 ARHGAP19Q14CB8 494 aa9.27□□□□□ -0.92
GABPA-201ENST00000354828 UNC50Q53HI1 259 aa9.27□□□□□ -0.92
GABPA-201ENST00000354828 SLC25A24Q6NUK1 477 aa9.27□□□□□ -0.92
GABPA-201ENST00000354828 HSDL2Q6YN16 418 aa9.27□□□□□ -0.92
GABPA-201ENST00000354828 ZFAND4Q86XD8 727 aa9.27□□□□□ -0.92
GABPA-201ENST00000354828 KDM1BQ8NB78 822 aa9.27□□□□□ -0.92
GABPA-201ENST00000354828 OR10G2Q8NGC3 310 aa9.27□□□□□ -0.92
GABPA-201ENST00000354828 CD200R1Q8TD46 325 aa9.27□□□□□ -0.92
GABPA-201ENST00000354828 FAM192AQ9GZU8 254 aa9.27□□□□□ -0.92
GABPA-201ENST00000354828 RNPEPL1Q9HAU8 725 aa9.27□□□□□ -0.92
GABPA-201ENST00000354828 SOX30O94993 753 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 FADS2O95864 444 aaKnown RBP9.27□□□□□ -0.93
GABPA-201ENST00000354828 ZNF20P17024 532 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 CCL11P51671 97 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 EEFSECP57772 596 aaKnown RBP9.27□□□□□ -0.93
GABPA-201ENST00000354828 CHAF1BQ13112 559 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 DGUOKQ16854 277 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 ZNF789Q5FWF6 425 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 CARD17Q5XLA6 110 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 SATL1Q86VE3 508 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 CHST4Q8NCG5 386 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 TOR1AIP2Q8NFQ8 470 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 IFI44Q8TCB0 444 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 CD180Q99467 661 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 SLC39A3Q9BRY0 314 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 OSBPL11Q9BXB4 747 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 PRSS21Q9Y6M0 314 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 POLR2AP24928 1970 aaKnown RBP9.27□□□□□ -0.93
GABPA-201ENST00000354828 A0A1W2PPL8 197 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 H0Y8X5 98 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 ZNF208O43345 1280 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 ALDOAP04075 364 aaKnown RBP9.27□□□□□ -0.93
GABPA-201ENST00000354828 BCKDHAP12694 445 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 CCR7P32248 378 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 DIO3P55073 304 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 C14orf28Q4W4Y0 310 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 C6orf132Q5T0Z8 1188 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 TMEM214Q6NUQ4 689 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms