RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 PPM1DO15297 605 aa18.62■□□□□ 0.57
COL13A1-201ENST00000354547 ALOX5P09917 674 aa18.62■□□□□ 0.57
COL13A1-201ENST00000354547 SEC23BQ15437 767 aa18.62■□□□□ 0.57
COL13A1-201ENST00000354547 LSRQ86X29 649 aaPredicted RBP18.62■□□□□ 0.57
COL13A1-201ENST00000354547 KLHDC8AQ8IYD2 350 aa18.62■□□□□ 0.57
COL13A1-201ENST00000354547 PARP16Q8N5Y8 322 aa18.62■□□□□ 0.57
COL13A1-201ENST00000354547 CLN6Q9NWW5 311 aa18.62■□□□□ 0.57
COL13A1-201ENST00000354547 PI15O43692 258 aa18.62■□□□□ 0.57
COL13A1-201ENST00000354547 ENTPD6O75354 484 aa18.62■□□□□ 0.57
COL13A1-201ENST00000354547 SPNP16150 400 aa18.62■□□□□ 0.57
COL13A1-201ENST00000354547 RHCEP18577 417 aa18.62■□□□□ 0.57
COL13A1-201ENST00000354547 CBLP22681 906 aa18.62■□□□□ 0.57
COL13A1-201ENST00000354547 PCBP3P57721 371 aaKnown RBP18.62■□□□□ 0.57
COL13A1-201ENST00000354547 PCDH1Q08174 1060 aa18.62■□□□□ 0.57
COL13A1-201ENST00000354547 ZNF658BQ4V348 819 aaPredicted RBP18.62■□□□□ 0.57
COL13A1-201ENST00000354547 ANKRD53Q8N9V6 530 aa18.62■□□□□ 0.57
COL13A1-201ENST00000354547 TFGQ92734 400 aaPredicted RBP18.62■□□□□ 0.57
COL13A1-201ENST00000354547 FKBP14Q9NWM8 211 aa18.62■□□□□ 0.57
COL13A1-201ENST00000354547 NFKBIL1Q9UBC1 381 aaPredicted RBP18.62■□□□□ 0.57
COL13A1-201ENST00000354547 ALPPL2P10696 532 aa18.61■□□□□ 0.57
COL13A1-201ENST00000354547 UQCRC2P22695 453 aa18.61■□□□□ 0.57
COL13A1-201ENST00000354547 RPL3P39023 403 aaKnown RBP18.61■□□□□ 0.57
COL13A1-201ENST00000354547 SOX3P41225 446 aa18.61■□□□□ 0.57
COL13A1-201ENST00000354547 AGAP7PQ5VUJ5 663 aa18.61■□□□□ 0.57
COL13A1-201ENST00000354547 MEX3DQ86XN8 651 aaKnown RBP18.61■□□□□ 0.57
COL13A1-201ENST00000354547 FAM20CQ8IXL6 584 aa18.61■□□□□ 0.57
COL13A1-201ENST00000354547 NRSN1Q8IZ57 195 aa18.61■□□□□ 0.57
COL13A1-201ENST00000354547 MACROD1Q9BQ69 325 aa18.61■□□□□ 0.57
COL13A1-201ENST00000354547 CLEC2DQ9UHP7 191 aa18.61■□□□□ 0.57
COL13A1-201ENST00000354547 TMCC3Q9ULS5 477 aa18.61■□□□□ 0.57
COL13A1-201ENST00000354547 TCF20Q9UGU0 1960 aaKnown RBP18.61■□□□□ 0.57
COL13A1-201ENST00000354547 GLOD5A6NK44 160 aa18.61■□□□□ 0.57
COL13A1-201ENST00000354547 CTDSP2O14595 271 aa18.61■□□□□ 0.57
COL13A1-201ENST00000354547 TNNI3P19429 210 aa18.61■□□□□ 0.57
COL13A1-201ENST00000354547 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.61■□□□□ 0.57
COL13A1-201ENST00000354547 LINC00299Q6ZSB3 139 aa18.61■□□□□ 0.57
COL13A1-201ENST00000354547 KIAA0907Q7Z7F0 614 aaPredicted RBP18.61■□□□□ 0.57
COL13A1-201ENST00000354547 C17orf64Q86WR6 236 aa18.61■□□□□ 0.57
COL13A1-201ENST00000354547 MRPL43Q8N983 215 aaKnown RBP18.61■□□□□ 0.57
COL13A1-201ENST00000354547 ZNF557Q8N988 423 aaPredicted RBP18.61■□□□□ 0.57
COL13A1-201ENST00000354547 KBTBD8Q8NFY9 601 aa18.61■□□□□ 0.57
COL13A1-201ENST00000354547 CNPPD1Q9BV87 410 aa18.61■□□□□ 0.57
COL13A1-201ENST00000354547 SAGE1Q9NXZ1 904 aa18.61■□□□□ 0.57
COL13A1-201ENST00000354547 LATO43561 262 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 SEMA7AO75326 666 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 PRNPP04156 253 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 CISD3P0C7P0 127 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 MAPK9P45984 424 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 VEGFBP49765 207 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 PRKAG1P54619 331 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 E2F2Q14209 437 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 LRRC26Q2I0M4 334 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 NCCRP1Q6ZVX7 275 aaPredicted RBP18.6■□□□□ 0.57
COL13A1-201ENST00000354547 CCDC80Q76M96 950 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 C6orf120Q7Z4R8 191 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 SLC34A3Q8N130 599 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 KRT78Q8N1N4 520 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 IQCF1Q8N6M8 205 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 OR5D16Q8NGK9 328 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 POF1BQ8WVV4 589 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 XAGE5Q8WWM1 108 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 YIPF4Q9BSR8 244 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 CFHR5Q9BXR6 569 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 C14orf119Q9NWQ9 140 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 MRPS23Q9Y3D9 190 aaKnown RBP18.6■□□□□ 0.57
COL13A1-201ENST00000354547 XIRP2A4UGR9 3374 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 OTOL1A6NHN0 477 aaPredicted RBP18.6■□□□□ 0.57
COL13A1-201ENST00000354547 CYP7B1O75881 506 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 TBX6O95947 436 aaPredicted RBP18.6■□□□□ 0.57
COL13A1-201ENST00000354547 ADRB3P13945 408 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 ACADLP28330 430 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 CTNNB1P35222 781 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 UGT2B10P36537 528 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 BCL7AQ4VC05 210 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 AMER3Q8N944 861 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 GPR32P1Q8NGA4 272 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 RAD51AP1Q96B01 352 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 WDR34Q96EX3 536 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 NUAK2Q9H093 628 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 TRPC4Q9UBN4 977 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 LRRK1Q38SD2 2015 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 MYO10Q9HD67 2058 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 WWP2O00308 870 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 ARHGAP33O14559 1287 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 PDPK1O15530 556 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 RGS5O15539 181 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 PRKRAO75569 313 aaKnown RBP18.6■□□□□ 0.57
COL13A1-201ENST00000354547 PCCBP05166 539 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 LINC00271P0C7V0 271 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 PIK3CBP42338 1070 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 KIAA1958Q8N8K9 716 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 LRIG1Q96JA1 1093 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 KCNK12Q9HB15 430 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 DYRK4Q9NR20 520 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 TEX10Q9NXF1 929 aaPredicted RBP18.6■□□□□ 0.57
COL13A1-201ENST00000354547 SPATA7Q9P0W8 599 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 FTSJ1Q9UET6 329 aa18.6■□□□□ 0.57
COL13A1-201ENST00000354547 PNMA8CA0A1B0GUJ8 204 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 ANHXE9PGG2 379 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 SCAMP1O15126 338 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms