RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 OR8K5Q8NH50 307 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 NFKBIDQ8NI38 313 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 ADAMTS16Q8TE57 1224 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 MAL2Q969L2 176 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 GAL3ST3Q96A11 431 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 TAMM41Q96BW9 452 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 FBXL20Q96IG2 436 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 AMDHD1Q96NU7 426 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 KCNC2Q96PR1 638 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 OR2A5Q96R48 311 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 MBOAT4Q96T53 435 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 RBM4BQ9BQ04 359 aaKnown RBP6.56□□□□□ -1.36
TRIM55-203ENST00000350034 C17orf62Q9BQA9 187 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 RBM4Q9BWF3 364 aaKnown RBP6.56□□□□□ -1.36
TRIM55-203ENST00000350034 GPR174Q9BXC1 333 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 YTHDF1Q9BYJ9 559 aaKnown RBP6.56□□□□□ -1.36
TRIM55-203ENST00000350034 NLNQ9BYT8 704 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 GLIPR2Q9H4G4 154 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 CXorf56Q9H5V9 222 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 CAAP1Q9H8G2 361 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 SMURF2Q9HAU4 748 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 LTB4R2Q9NPC1 389 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 A4GALTQ9NPC4 353 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 SLC35C2Q9NQQ7 365 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 PRDM9Q9NQV7 894 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 ADPRHL2Q9NX46 363 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 LYARQ9NX58 379 aaKnown RBP6.56□□□□□ -1.36
TRIM55-203ENST00000350034 ZSCAN32Q9NX65 697 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 ACTR10Q9NZ32 417 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 IFT80Q9P2H3 777 aaPredicted RBP6.56□□□□□ -1.36
TRIM55-203ENST00000350034 CPNE7Q9UBL6 633 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 WNT16Q9UBV4 365 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 TMEFF2Q9UIK5 374 aaPredicted RBP6.56□□□□□ -1.36
TRIM55-203ENST00000350034 ABCG2Q9UNQ0 655 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 MYRFQ9Y2G1 1151 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 PADI2Q9Y2J8 665 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 KLHL20Q9Y2M5 609 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 MRPS17Q9Y2R5 130 aaKnown RBP6.56□□□□□ -1.36
TRIM55-203ENST00000350034 ATG4BQ9Y4P1 393 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 SNX11Q9Y5W9 270 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 SLCO1B1Q9Y6L6 691 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 ZNF462Q96JM2 2506 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 ATG2BQ96BY7 2078 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 TRBV23OR9-2A0A075B6M9 112 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 A0A0G2JN53 185 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 MYOCOSA0A1B0GUC4 107 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 SMIM31A0A1B0GVY4 71 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 MED19A0JLT2 244 aaPredicted RBP6.55□□□□□ -1.36
TRIM55-203ENST00000350034 KRBA1A5PL33 1030 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 OR6C74A6NCV1 312 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 PRAMEF25A6NGN4 478 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 M0QX08 132 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 GNGT2O14610 69 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 PGRMC2O15173 223 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 SLC16A6O15403 523 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 ZW10O43264 779 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 PROM1O43490 865 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 GFRA3O60609 400 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 CTSVO60911 334 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 AIFM1O95831 613 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 RECKO95980 971 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 CLPTM1O96005 669 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 VIPP01282 170 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 IFNA14P01570 189 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 ALBP02768 609 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 WNT1P04628 370 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 SERPIND1P05546 499 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 CELA2BP08218 269 aaPredicted RBP6.55□□□□□ -1.36
TRIM55-203ENST00000350034 TFPTP0C1Z6 253 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 ITGAMP11215 1152 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 CD27P26842 260 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 DNAJA1P31689 397 aaKnown RBP6.55□□□□□ -1.36
TRIM55-203ENST00000350034 SOAT1P35610 550 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 RXRGP48443 463 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 ALDH3B2P48448 385 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 LSSP48449 732 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 ALDH9A1P49189 494 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 NR1H2P55055 460 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 MANFP55145 182 aaKnown RBP6.55□□□□□ -1.36
TRIM55-203ENST00000350034 SNRPNP63162 240 aaKnown RBP6.55□□□□□ -1.36
TRIM55-203ENST00000350034 TGM3Q08188 693 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 SIM2Q14190 667 aaPredicted RBP6.55□□□□□ -1.36
TRIM55-203ENST00000350034 CCDC85BQ15834 202 aaPredicted RBP6.55□□□□□ -1.36
TRIM55-203ENST00000350034 TTC23Q5W5X9 447 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 ANKRD34AQ69YU3 496 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 KDM4DQ6B0I6 523 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 PTCRAQ6ISU1 281 aaPredicted RBP6.55□□□□□ -1.36
TRIM55-203ENST00000350034 KRT80Q6KB66 452 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 SLC48A1Q6P1K1 146 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 FAHD1Q6P587 224 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 BORAQ6PGQ7 559 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 FIGLAQ6QHK4 219 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 SPESP1Q6UW49 350 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 TMEM26Q6ZUK4 368 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 CEP68Q76N32 757 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 RNF44Q7L0R7 432 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 C6orf120Q7Z4R8 191 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 TRIM73Q86UV7 250 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 IQCHQ86VS3 1027 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 CYP4Z1Q86W10 505 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms