RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 TNFRSF11BO00300 401 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 SLC1A7O00341 560 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 AXIN1O15169 862 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 CCDC159P0C7I6 412 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 CYP4B1P13584 511 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 HOXB3P14651 431 aaPredicted RBP19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 OR1E2P47887 323 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 IL5RAQ01344 420 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 SLC9A5Q14940 896 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 EOGTQ5NDL2 527 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 TPRG1LQ5T0D9 272 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 KIAA1614Q5VZ46 1190 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 ZNF425Q6IV72 752 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 C6orf120Q7Z4R8 191 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 ZNF420Q8TAQ5 688 aaPredicted RBP19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 HMGB4Q8WW32 186 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 LCN9Q8WX39 176 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 KCNC2Q96PR1 638 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 RAB23Q9ULC3 237 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 SNX7Q9UNH6 387 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 TESMINQ9Y4I5 508 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 GMPPBQ9Y5P6 360 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 ERI3O43414 337 aaKnown RBP19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 NARSO43776 548 aaKnown RBP19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 STATHP02808 62 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 CHRM5P08912 532 aaPredicted RBP19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 DCKP27707 260 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 SPDYE7PQ495Y7 208 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 XAF1Q6GPH4 301 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 TNFAIP8L2Q6P589 184 aaPredicted RBP19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 ABHD17CQ6PCB6 329 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 OR4E2Q8NGC2 313 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 UCN3Q969E3 161 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 APOL4Q9BPW4 351 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 PRDM7Q9NQW5 492 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 EXD2Q9NVH0 621 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 CDC14AQ9UNH5 594 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 PCDHGA4Q9Y5G9 962 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 SNX11Q9Y5W9 270 aa19.32■□□□□ 0.68
CHRNA3-202ENST00000348639 TRIOO75962 3097 aa19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 ISM1B1AKI9 464 aa19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 TNFRSF10CO14798 259 aa19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 B4GALT2O60909 372 aa19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 GABRG2P18507 467 aa19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 HIST1H1TP22492 207 aaPredicted RBP19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 BMP8BP34820 402 aa19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 RPS26P62854 115 aaKnown RBP19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 TSPYL5Q86VY4 417 aaPredicted RBP19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 SPARTQ8N0X7 666 aa19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 MFSD9Q8NBP5 474 aa19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 OR2L5Q8NG80 312 aa19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 OR4C15Q8NGM1 316 aa19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 CCL4L1Q8NHW4 92 aa19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 GIPC3Q8TF64 312 aa19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 SLC38A5Q8WUX1 472 aa19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 SGCDQ92629 289 aa19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 DNASE1L2Q92874 299 aa19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 DOK1Q99704 481 aa19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 MACROD1Q9BQ69 325 aa19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 FANCEQ9HB96 536 aa19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 SLC35C2Q9NQQ7 365 aa19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 ZNF624Q9P2J8 865 aaPredicted RBP19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 EBF1Q9UH73 591 aa19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 KLF15Q9UIH9 416 aa19.31■□□□□ 0.68
CHRNA3-202ENST00000348639 LRRC72A6NJI9 287 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 C4orf51C9J302 202 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 E9PQ18 207 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 PRAMEF10O60809 474 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 DNAJB5O75953 348 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 HTR1AP08908 422 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 CCT3P49368 545 aaKnown RBP19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 NPRL3Q12980 569 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 SLAMF1Q13291 335 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 MRM1Q6IN84 353 aaKnown RBP19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 SMYD1Q8NB12 490 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 SRFBP1Q8NEF9 429 aaKnown RBP19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 OR13F1Q8NGS4 319 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 CNIH3Q8TBE1 160 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 FAM3CQ92520 227 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 C12orf43Q96C57 262 aaKnown RBP19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 NDRG2Q9UN36 371 aaKnown RBP19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 ASB4Q9Y574 426 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 GOLGA4Q13439 2230 aaKnown RBP19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 TRBV23OR9-2A0A075B6M9 112 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 C5orf58C9J3I9 102 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 MAN2B1O00754 1011 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 GUCY1B2O75343 617 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 ANGPTL1O95841 491 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 TFPTP0C1Z6 253 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 ATP5A1P25705 553 aaKnown RBP19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 XCR1P46094 333 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 SPIBQ01892 262 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 COL19A1Q14993 1142 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 TOR1AIP1Q5JTV8 583 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 ACOT4Q8N9L9 421 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 OR8K5Q8NH50 307 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 AMDHD1Q96NU7 426 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 PITX2Q99697 317 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 GABARAPL3Q9BY60 117 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 TMEM168Q9H0V1 697 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms