RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 SORBS1Q9BX66 1292 aaKnown RBP11.14□□□□□ -0.63
SNCA-202ENST00000345009 RPF2Q9H7B2 306 aaKnown RBP11.14□□□□□ -0.63
SNCA-202ENST00000345009 TNFRSF12AQ9NP84 129 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 PRTFDC1Q9NRG1 225 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 LANCL2Q9NS86 450 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 SIRT5Q9NXA8 310 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 P4HTMQ9NXG6 502 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 VTI1BQ9UEU0 232 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 HAO1Q9UJM8 370 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 CCDC88CQ9P219 2028 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 NSG1A0A0A6YYJ2 146 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 NPIPB8E9PQR5 432 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 FAM227AF5H4B4 570 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 PIP5K1BO14986 540 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 DYRK3O43781 588 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 PCDH7O60245 1069 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 DNAJB6O75190 326 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 SNNO75324 88 aaPredicted RBP11.13□□□□□ -0.63
SNCA-202ENST00000345009 JRKO75564 520 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 LYPLA1O75608 230 aaPredicted RBP11.13□□□□□ -0.63
SNCA-202ENST00000345009 ANXA4P09525 319 aaPredicted RBP11.13□□□□□ -0.63
SNCA-202ENST00000345009 NR2F6P10588 404 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 PCSK2P16519 638 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 DDX5P17844 614 aaKnown RBP11.13□□□□□ -0.63
SNCA-202ENST00000345009 PRPH2P23942 346 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 TIA1P31483 386 aaKnown RBP eCLIP11.13□□□□□ -0.63
SNCA-202ENST00000345009 RHAGQ02094 409 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 MAD2L1Q13257 205 aaPredicted RBP11.13□□□□□ -0.63
SNCA-202ENST00000345009 HEPACAMQ14CZ8 416 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 UGT3A2Q3SY77 523 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 ATP6AP1LQ52LC2 224 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 FAM69BQ5VUD6 431 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 CPEB2Q7Z5Q1 589 aaKnown RBP11.13□□□□□ -0.63
SNCA-202ENST00000345009 PPP1R32Q7Z5V6 425 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 ZNF781Q8N8C0 355 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 FAM47BQ8NA70 645 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 ADAMTS17Q8TE56 1095 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 C19orf60Q96EN9 201 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 ZNF717Q9BY31 904 aaPredicted RBP11.13□□□□□ -0.63
SNCA-202ENST00000345009 RBCK1Q9BYM8 510 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 PRORYQ9H606 182 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 LRTM1Q9HBL6 345 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 ATP13A2Q9NQ11 1180 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 ATG4BQ9Y4P1 393 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 ASB4Q9Y574 426 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 HS3ST3B1Q9Y662 390 aa11.13□□□□□ -0.63
SNCA-202ENST00000345009 LOC102723996A0A087X1L8 192 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 C1orf226A1L170 272 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 TMEM233B4DJY2 109 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 HDAC3O15379 428 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 TMPRSS11DO60235 418 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 HPP00738 406 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 GBAP04062 536 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 COX7A2P14406 83 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 DRD2P14416 443 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 TPP2P29144 1249 aaPredicted RBP11.12□□□□□ -0.63
SNCA-202ENST00000345009 OR4D2P58180 307 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 TNFRSF17Q02223 184 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 AIMP2Q13155 320 aaKnown RBP11.12□□□□□ -0.63
SNCA-202ENST00000345009 ATP1A4Q13733 1029 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 COL28A1Q2UY09 1125 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 DCAF10Q5QP82 559 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 FAAH2Q6GMR7 532 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 OR52E8Q6IFG1 317 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 MRM1Q6IN84 353 aaKnown RBP11.12□□□□□ -0.63
SNCA-202ENST00000345009 NOXRED1Q6NXP6 359 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 TMEM205Q6UW68 189 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 KIRREL2Q6UWL6 708 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 APLFQ8IW19 511 aaPredicted RBP11.12□□□□□ -0.63
SNCA-202ENST00000345009 SAMD14Q8IZD0 417 aaPredicted RBP11.12□□□□□ -0.63
SNCA-202ENST00000345009 OR11G2Q8NGC1 345 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 TUBGCP3Q96CW5 907 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 APIPQ96GX9 242 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 RBM18Q96H35 190 aaKnown RBP11.12□□□□□ -0.63
SNCA-202ENST00000345009 MAGEB18Q96M61 343 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 SORT1Q99523 831 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 LPAR4Q99677 370 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 PELOQ9BRX2 385 aaKnown RBP11.12□□□□□ -0.63
SNCA-202ENST00000345009 TUBB6Q9BUF5 446 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 ING2Q9H160 280 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 FBXL4Q9UKA2 621 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 CACNA1GO43497 2377 aa11.12□□□□□ -0.63
SNCA-202ENST00000345009 PIEZO2Q9H5I5 2752 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 CNTRLQ7Z7A1 2325 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 A0A1W2PR48 441 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 ARGFXA6NJG6 315 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 SOCS6O14544 535 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 ST8SIA5O15466 376 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 SKAP2O75563 359 aaPredicted RBP11.11□□□□□ -0.63
SNCA-202ENST00000345009 IFNA16P05015 189 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 SFTPCP11686 197 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 TNNI3P19429 210 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 MAOAP21397 527 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 PIK3R1P27986 724 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 ARRB2P32121 409 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 ASMTP46597 345 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 HNRNPH2P55795 449 aaKnown RBP11.11□□□□□ -0.63
SNCA-202ENST00000345009 FOXL2P58012 376 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 TAS2R50P59544 299 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 BTG2P78543 158 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms