RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 WRAP53Q9BUR4 548 aaKnown RBP17.37■□□□□ 0.37
SMC4-201ENST00000344722 MARCH4Q9P2E8 410 aaPredicted RBP17.37■□□□□ 0.37
SMC4-201ENST00000344722 SMAD9O15198 467 aaKnown RBP17.36■□□□□ 0.37
SMC4-201ENST00000344722 KAT7O95251 611 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 TBX18O95935 607 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 IGFALSP35858 605 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 SLC44A3Q8N4M1 653 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 ZSCAN1Q8NBB4 408 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 IL12RB2Q99665 862 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 RGCCQ9H4X1 137 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 CACNG2Q9Y698 323 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 LOC285095A0A1B0GVY8 99 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 LRRC72A6NJI9 287 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 ARNTLO00327 626 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 PRAF2O60831 178 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 SEC14L2O76054 403 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 RASGRP1O95267 797 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 TFPIP10646 304 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 RGS6P49758 472 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 FAM129CQ86XR2 697 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 KLBQ86Z14 1044 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 BEST3Q8N1M1 668 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 TRMT61BQ9BVS5 477 aaKnown RBP17.36■□□□□ 0.37
SMC4-201ENST00000344722 DLGAP4Q9Y2H0 992 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 MANSC4A6NHS7 340 aaPredicted RBP17.36■□□□□ 0.37
SMC4-201ENST00000344722 ALPLP05186 524 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 TNFSF8P32971 234 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 SHMT2P34897 504 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 OR52B6Q8NGF0 335 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 DHRS1Q96LJ7 313 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 MRPS30Q9NP92 439 aaKnown RBP17.36■□□□□ 0.37
SMC4-201ENST00000344722 PTTG3PQ9NZH4 202 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 PCDHGA12O60330 932 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 MAFKO60675 156 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 CLDN7O95471 211 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 JUNBP17275 347 aaPredicted RBP17.36■□□□□ 0.37
SMC4-201ENST00000344722 ALAS2P22557 587 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 CDKN2CP42773 168 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 BDKRB1P46663 353 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 PITPNBP48739 271 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 VAMP2P63027 116 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 POTEKPQ9BYX7 375 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 OR10A4Q9H209 315 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 OR51J1Q9H342 316 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 ARFGEF2Q9Y6D5 1785 aa17.36■□□□□ 0.37
SMC4-201ENST00000344722 OSMP13725 252 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 CARD16Q5EG05 197 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 METTL11BQ5VVY1 283 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 MTMR14Q8NCE2 650 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 OR8S1Q8NH09 359 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 OR5P2Q8WZ92 322 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 ZNF700Q9H0M5 742 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 ERVK-19Q9WJR5 959 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 C1orf196B1AJZ1 125 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 SLC16A5O15375 505 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 ADH1CP00326 375 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 LACC1Q8IV20 430 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 SLC5A11Q8WWX8 675 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 OR51B5Q9H339 312 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 RANGRFQ9HD47 186 aaPredicted RBP17.35■□□□□ 0.37
SMC4-201ENST00000344722 ZNF20P17024 532 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 PLEKHS1Q5SXH7 462 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 DTX3Q8N9I9 347 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 CRTAC1Q9NQ79 661 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 IRS2Q9Y4H2 1338 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 ZNF821O75541 412 aaPredicted RBP17.35■□□□□ 0.37
SMC4-201ENST00000344722 FGF19O95750 216 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 WNT4P56705 351 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 LRRC37A5PQ49AS3 106 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 ADGRF1Q5T601 910 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 CASTOR1Q8WTX7 329 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 ELMOD3Q96FG2 381 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 RBM18Q96H35 190 aaKnown RBP17.35■□□□□ 0.37
SMC4-201ENST00000344722 RBCK1Q9BYM8 510 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 OR2AG1Q9H205 316 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 ADAP2Q9NPF8 381 aa17.35■□□□□ 0.37
SMC4-201ENST00000344722 CLDN4O14493 209 aa17.34■□□□□ 0.37
SMC4-201ENST00000344722 TFP02787 698 aa17.34■□□□□ 0.37
SMC4-201ENST00000344722 TIA1P31483 386 aaKnown RBP eCLIP17.34■□□□□ 0.375e-7■■■■□ 23.6
SMC4-201ENST00000344722 MTNR1AP48039 350 aa17.34■□□□□ 0.37
SMC4-201ENST00000344722 PRMT2P55345 433 aa17.34■□□□□ 0.37
SMC4-201ENST00000344722 MLLT1Q03111 559 aaPredicted RBP17.34■□□□□ 0.37
SMC4-201ENST00000344722 RPL13AP3Q6NVV1 102 aa17.34■□□□□ 0.37
SMC4-201ENST00000344722 ARSKQ6UWY0 536 aa17.34■□□□□ 0.37
SMC4-201ENST00000344722 FOXRED2Q8IWF2 684 aa17.34■□□□□ 0.37
SMC4-201ENST00000344722 FUBP1Q96AE4 644 aaKnown RBP17.34■□□□□ 0.37
SMC4-201ENST00000344722 MOAP1Q96BY2 351 aa17.34■□□□□ 0.37
SMC4-201ENST00000344722 OCEL1Q9H607 264 aa17.34■□□□□ 0.37
SMC4-201ENST00000344722 CNOT2Q9NZN8 540 aaKnown RBP17.34■□□□□ 0.37
SMC4-201ENST00000344722 ICMTO60725 284 aa17.34■□□□□ 0.37
SMC4-201ENST00000344722 DDNO94850 711 aaPredicted RBP17.34■□□□□ 0.37
SMC4-201ENST00000344722 CDK10Q15131 360 aa17.34■□□□□ 0.37
SMC4-201ENST00000344722 RAB6CQ53S08 254 aa17.34■□□□□ 0.37
SMC4-201ENST00000344722 STEAP3Q658P3 488 aa17.34■□□□□ 0.37
SMC4-201ENST00000344722 SYT14Q8NB59 555 aa17.34■□□□□ 0.37
SMC4-201ENST00000344722 RAB8BQ92930 207 aa17.34■□□□□ 0.37
SMC4-201ENST00000344722 COQ8BQ96D53 544 aa17.34■□□□□ 0.37
SMC4-201ENST00000344722 RAB6CQ9H0N0 254 aa17.34■□□□□ 0.37
SMC4-201ENST00000344722 ABCD2Q9UBJ2 740 aa17.34■□□□□ 0.37
SMC4-201ENST00000344722 C14orf166Q9Y224 244 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms