RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 C6orf120Q7Z4R8 191 aa18.94■□□□□ 0.62
RTN1-202ENST00000342503 PJA1Q8NG27 643 aa18.94■□□□□ 0.62
RTN1-202ENST00000342503 OR5K1Q8NHB7 308 aa18.94■□□□□ 0.62
RTN1-202ENST00000342503 BAHD1Q8TBE0 780 aaPredicted RBP18.94■□□□□ 0.62
RTN1-202ENST00000342503 CLDN23Q96B33 292 aa18.94■□□□□ 0.62
RTN1-202ENST00000342503 SDCCAG3Q96C92 435 aa18.94■□□□□ 0.62
RTN1-202ENST00000342503 THAP11Q96EK4 314 aa18.94■□□□□ 0.62
RTN1-202ENST00000342503 AMDHD1Q96NU7 426 aa18.94■□□□□ 0.62
RTN1-202ENST00000342503 MAPKAP1Q9BPZ7 522 aa18.94■□□□□ 0.62
RTN1-202ENST00000342503 LYARQ9NX58 379 aaKnown RBP18.94■□□□□ 0.62
RTN1-202ENST00000342503 LOC105369274A0A096LPK9 316 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 LOC102723532A0A0G2JNH3 316 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 OR5K3A6NET4 321 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 TMEM229AB2RXF0 380 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 PROM1O43490 865 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 NOBOXO60393 691 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 ERAL1O75616 437 aaKnown RBP18.93■□□□□ 0.62
RTN1-202ENST00000342503 NME1P15531 152 aaKnown RBP18.93■□□□□ 0.62
RTN1-202ENST00000342503 NTSP30990 170 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 PPP1CAP62136 330 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 RPS26P62854 115 aaKnown RBP18.93■□□□□ 0.62
RTN1-202ENST00000342503 RACK1P63244 317 aaKnown RBP18.93■□□□□ 0.62
RTN1-202ENST00000342503 MYBPC3Q14896 1274 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 FRMPD2BQ6IN97 320 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 CCDC80Q76M96 950 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 IQCHQ86VS3 1027 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 OOSP2Q86WS3 158 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 RBM12BQ8IXT5 1001 aaKnown RBP18.93■□□□□ 0.62
RTN1-202ENST00000342503 ST13P4Q8IZP2 240 aaPredicted RBP18.93■□□□□ 0.62
RTN1-202ENST00000342503 HS3ST5Q8IZT8 346 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 OR4N4Q8N0Y3 316 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 DHRSXQ8N5I4 330 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 CAMKK1Q8N5S9 505 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 HORMAD2Q8N7B1 307 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 PSMA8Q8TAA3 256 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 ZCCHC10Q8TBK6 192 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 CYGBQ8WWM9 190 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 BBS4Q96RK4 519 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 TM9SF3Q9HD45 589 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 VNN3Q9NY84 501 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 CES1P1Q9UKY3 287 aa18.93■□□□□ 0.62
RTN1-202ENST00000342503 SH3BP5O60239 455 aa18.92■□□□□ 0.62
RTN1-202ENST00000342503 HPRP00739 348 aa18.92■□□□□ 0.62
RTN1-202ENST00000342503 ALPLP05186 524 aa18.92■□□□□ 0.62
RTN1-202ENST00000342503 SMIM10L1P0DMW3 83 aa18.92■□□□□ 0.62
RTN1-202ENST00000342503 TYRP1P17643 537 aa18.92■□□□□ 0.62
RTN1-202ENST00000342503 DCTP40126 519 aa18.92■□□□□ 0.62
RTN1-202ENST00000342503 NCBP2P52298 156 aaKnown RBP eCLIP18.92■□□□□ 0.62
RTN1-202ENST00000342503 MAZP56270 477 aaKnown RBP18.92■□□□□ 0.62
RTN1-202ENST00000342503 KCNJ10P78508 379 aa18.92■□□□□ 0.62
RTN1-202ENST00000342503 VLDLRP98155 873 aa18.92■□□□□ 0.62
RTN1-202ENST00000342503 ELOCQ15369 112 aa18.92■□□□□ 0.62
RTN1-202ENST00000342503 GPR153Q6NV75 609 aa18.92■□□□□ 0.62
RTN1-202ENST00000342503 CEACAM20Q6UY09 585 aa18.92■□□□□ 0.62
RTN1-202ENST00000342503 CAMKVQ8NCB2 501 aa18.92■□□□□ 0.62
RTN1-202ENST00000342503 LMX1AQ8TE12 382 aa18.92■□□□□ 0.62
RTN1-202ENST00000342503 SMIM10Q96HG1 83 aa18.92■□□□□ 0.62
RTN1-202ENST00000342503 ZFYVE21Q9BQ24 234 aa18.92■□□□□ 0.62
RTN1-202ENST00000342503 SMURF2Q9HAU4 748 aa18.92■□□□□ 0.62
RTN1-202ENST00000342503 MYO1GB0I1T2 1018 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 E2F6O75461 281 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 TNFAIP8O95379 198 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 OPN1SWP03999 348 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 GNAO1P09471 354 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 MYF6P23409 242 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 GPC1P35052 558 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 CAPGP40121 348 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 CCT3P49368 545 aaKnown RBP18.91■□□□□ 0.62
RTN1-202ENST00000342503 SELENOWP63302 87 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 RELAQ04206 551 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 ZNF750Q32MQ0 723 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 OR2T5Q6IEZ7 315 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 KRT80Q6KB66 452 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 SLC48A1Q6P1K1 146 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 TNFAIP8L2Q6P589 184 aaPredicted RBP18.91■□□□□ 0.62
RTN1-202ENST00000342503 ZNF438Q7Z4V0 828 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 DEFB123Q8N688 67 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 OR2T29Q8NH02 315 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 ZFP28Q8NHY6 868 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 RSC1A1Q92681 617 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 TAMM41Q96BW9 452 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 CNRIP1Q96F85 164 aaPredicted RBP18.91■□□□□ 0.62
RTN1-202ENST00000342503 HSPA12BQ96MM6 686 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 DOHHQ9BU89 302 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 OSBPL10Q9BXB5 764 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 SOX17Q9H6I2 414 aaPredicted RBP18.91■□□□□ 0.62
RTN1-202ENST00000342503 ZNF696Q9H7X3 374 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 ANGPT4Q9Y264 503 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 TP53BP1Q12888 1972 aaPredicted RBP18.91■□□□□ 0.62
RTN1-202ENST00000342503 MYOCOSA0A1B0GUC4 107 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 H0YGG7 62 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 DIRAS1O95057 198 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 SMIM18P0DKX4 95 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 NELFEP18615 380 aaKnown RBP18.91■□□□□ 0.62
RTN1-202ENST00000342503 BCKDHBP21953 392 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 CLCN2P51788 898 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 ARF3P61204 181 aaPredicted RBP18.91■□□□□ 0.62
RTN1-202ENST00000342503 DUSP2Q05923 314 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 BIRC2Q13490 618 aa18.91■□□□□ 0.62
RTN1-202ENST00000342503 SUZ12Q15022 739 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms