RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 ALDH4A1P30038 563 aa21.95■■□□□ 1.1
CLPTM1-201ENST00000337392 DSTNP60981 165 aa21.95■■□□□ 1.1
CLPTM1-201ENST00000337392 MVKQ03426 396 aa21.95■■□□□ 1.1
CLPTM1-201ENST00000337392 RPE65Q16518 533 aa21.95■■□□□ 1.1
CLPTM1-201ENST00000337392 NUDT18Q6ZVK8 323 aa21.95■■□□□ 1.1
CLPTM1-201ENST00000337392 WDR53Q7Z5U6 358 aaPredicted RBP21.95■■□□□ 1.1
CLPTM1-201ENST00000337392 GTPBP3Q969Y2 492 aaKnown RBP21.95■■□□□ 1.1
CLPTM1-201ENST00000337392 SIPA1Q96FS4 1042 aa21.95■■□□□ 1.1
CLPTM1-201ENST00000337392 MRPS30Q9NP92 439 aaKnown RBP21.95■■□□□ 1.1
CLPTM1-201ENST00000337392 hCG_2014768A0A024R1R8 64 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 PRAMEF27A3QJZ7 478 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 LRIT2A6NDA9 550 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 H3BQ06 376 aaPredicted RBP21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 BTN3A3O00478 584 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 SEMA7AO75326 666 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 C9P02748 559 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 CCR3P51677 355 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 LSM3P62310 102 aaKnown RBP21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 NPRL3Q12980 569 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 BNIP3Q12983 259 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 DGCR6Q14129 220 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 PUM1Q14671 1186 aaKnown RBP eCLIP21.94■■□□□ 1.14e-7■■□□□ 11.6
CLPTM1-201ENST00000337392 ARHGAP19Q14CB8 494 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 ZNF542PQ5EBM4 170 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 C18orf63Q68DL7 685 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 TRIM40Q6P9F5 258 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 COMTD1Q86VU5 262 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 ERI1Q8IV48 349 aaKnown RBP21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 NLNQ9BYT8 704 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 TMEM168Q9H0V1 697 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 EPS8L2Q9H6S3 715 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 PELI2Q9HAT8 420 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 KCNK12Q9HB15 430 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 ATG4BQ9Y4P1 393 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 CPNE6O95741 557 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 CERS1P27544 350 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 HYAL2Q12891 473 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 TMEM236Q5W0B7 351 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 VANGL1Q8TAA9 524 aaPredicted RBP21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 TMEM19Q96HH6 336 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 SELENONQ9NZV5 590 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 CORO2BQ9UQ03 480 aa21.94■■□□□ 1.1
CLPTM1-201ENST00000337392 TRBC2A0A5B9 178 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 PRSS38A1L453 326 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 PPIBP23284 216 aaKnown RBP21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 CD6P30203 668 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 LTBRP36941 435 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 NUDT6P53370 316 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 LRRC32Q14392 662 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 TEAD4Q15561 434 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 MAPK11Q15759 364 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 GPR19Q15760 415 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 SYPL1Q16563 259 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 RBM48Q5RL73 367 aaKnown RBP21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 KIAA1161Q6NSJ0 714 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 C6orf120Q7Z4R8 191 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 NUDT13Q86X67 352 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 CDCA3Q99618 268 aaPredicted RBP21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 GABARAPL1Q9H0R8 117 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 AHSPQ9NZD4 102 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 ISM1B1AKI9 464 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 PKLRP30613 574 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 KRT20P35900 424 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 OCA2Q04671 838 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 EMX1Q04741 257 aaPredicted RBP21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 ADAM15Q13444 863 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 SKIV2LQ15477 1246 aaKnown RBP21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 IFI44LQ53G44 452 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 OR4C11Q6IEV9 310 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 KCT2Q8NC54 265 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 RGMAQ96B86 450 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 NODALQ96S42 347 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 CTPS2Q9NRF8 586 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 PADI2Q9Y2J8 665 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 TRIOBPQ9H2D6 2365 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 TPST2O60704 377 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 FADS2O95864 444 aaKnown RBP21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 DCKP27707 260 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 HTR1BP28222 390 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 FEN1P39748 380 aaKnown RBP21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 GP2P55259 537 aaKnown RBP21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 LIM2P55344 173 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 EPS8Q12929 822 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 RPLP0P6Q8NHW5 317 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 TANKQ92844 425 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 MRGPRX1Q96LB2 322 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 ZNF300Q96RE9 604 aaPredicted RBP21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 QRSL1Q9H0R6 528 aaKnown RBP21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 PIAS3Q9Y6X2 628 aa21.93■■□□□ 1.1
CLPTM1-201ENST00000337392 DNAJB6O75190 326 aa21.92■■□□□ 1.1
CLPTM1-201ENST00000337392 JRKO75564 520 aa21.92■■□□□ 1.1
CLPTM1-201ENST00000337392 OR12D1P0DN82 309 aa21.92■■□□□ 1.1
CLPTM1-201ENST00000337392 ARAFP10398 606 aa21.92■■□□□ 1.1
CLPTM1-201ENST00000337392 ITGAMP11215 1152 aa21.92■■□□□ 1.1
CLPTM1-201ENST00000337392 IDH2P48735 452 aaKnown RBP21.92■■□□□ 1.1
CLPTM1-201ENST00000337392 ENTPD1P49961 510 aa21.92■■□□□ 1.1
CLPTM1-201ENST00000337392 HEPACAMQ14CZ8 416 aa21.92■■□□□ 1.1
CLPTM1-201ENST00000337392 LEXMQ3ZCV2 418 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms