RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 MS4A8Q9BY19 250 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 BHLHE41Q9C0J9 482 aaPredicted RBP8.41□□□□□ -1.06
SNCA-201ENST00000336904 CAPN10Q9HC96 672 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 TMEM74BQ9NUR3 256 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 ATAD3AQ9NVI7 634 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 ATP6V1HQ9UI12 483 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 KCNE3Q9Y6H6 103 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 LOC100506127A0A0U1RQW1 187 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 PNMA8CA0A1B0GUJ8 204 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 PRAMEF27A3QJZ7 478 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 CARNS1A5YM72 827 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 ZNF99A8MXY4 864 aaPredicted RBP8.41□□□□□ -1.06
SNCA-201ENST00000336904 ISM1B1AKI9 464 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 C5orf58C9J3I9 102 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 C5orf67F2Z3F1 127 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 PDPK1O15530 556 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 VEGFDO43915 354 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 STSP08842 583 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 HSD3B1P14060 373 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 MAGP20916 626 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 PTX3P26022 381 aaPredicted RBP8.41□□□□□ -1.06
SNCA-201ENST00000336904 HSD3B2P26439 372 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 OPRL1P41146 370 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 CCR8P51685 355 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 CSNK1G2P78368 415 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 PIN1Q13526 163 aaPredicted RBP8.41□□□□□ -1.06
SNCA-201ENST00000336904 MAPK11Q15759 364 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 ADPRMQ3LIE5 342 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 NDUFAF5Q5TEU4 345 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 C16orf87Q6PH81 154 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 TAGAPQ8N103 731 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 TP53I13Q8NBR0 393 aaPredicted RBP8.41□□□□□ -1.06
SNCA-201ENST00000336904 KCT2Q8NC54 265 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 OR10G6Q8NH81 332 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 C16orf58Q96GQ5 468 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 ZNF300Q96RE9 604 aaPredicted RBP8.41□□□□□ -1.06
SNCA-201ENST00000336904 AIF1LQ9BQI0 150 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 NLNQ9BYT8 704 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 DPEP2Q9H4A9 486 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 POLE4Q9NR33 117 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 GPR34Q9UPC5 381 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 KRBA1A5PL33 1030 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 K7EQS6 105 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 FOXE1O00358 373 aaPredicted RBP8.4□□□□□ -1.06
SNCA-201ENST00000336904 FFAR1O14842 300 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 SLC16A6O15403 523 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 SLC28A2O43868 658 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 GADD45GO95257 159 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 GASTP01350 101 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 APODP05090 189 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 RPS6KA3P51812 740 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 NUP107P57740 925 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 LASP1Q14847 261 aaKnown RBP8.4□□□□□ -1.06
SNCA-201ENST00000336904 EIF4HQ15056 248 aaKnown RBP8.4□□□□□ -1.06
SNCA-201ENST00000336904 SEC23BQ15437 767 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 LTB4RQ15722 352 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 TMEM196Q5HYL7 178 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 TMEM107Q6UX40 140 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 KIAA1324Q6UXG2 1013 aaKnown RBP8.4□□□□□ -1.06
SNCA-201ENST00000336904 C6orf120Q7Z4R8 191 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 TSPYL5Q86VY4 417 aaPredicted RBP8.4□□□□□ -1.06
SNCA-201ENST00000336904 P3H2Q8IVL5 708 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 DNAJB8Q8NHS0 232 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 PHF10Q8WUB8 498 aaKnown RBP8.4□□□□□ -1.06
SNCA-201ENST00000336904 KAT2AQ92830 837 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 MUL1Q969V5 352 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 FKBP10Q96AY3 582 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 ZG16BQ96DA0 208 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 CAMK1GQ96NX5 476 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 MIR1-1HGQ9H1L0 117 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 RHBGQ9H310 441 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 ZBTB20Q9HC78 741 aaPredicted RBP8.4□□□□□ -1.06
SNCA-201ENST00000336904 SLC6A20Q9NP91 592 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 MYNNQ9NPC7 610 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 C8orf4Q9NR00 106 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 BLOC1S6Q9UL45 172 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 NDRG4Q9ULP0 352 aaKnown RBP8.4□□□□□ -1.06
SNCA-201ENST00000336904 ATG4BQ9Y4P1 393 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 RNGTTO60942 597 aaKnown RBP8.4□□□□□ -1.06
SNCA-201ENST00000336904 EGFP01133 1207 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 CEACAM5P06731 702 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 ACSL1P33121 698 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 NCBP2P52298 156 aaKnown RBP eCLIP8.4□□□□□ -1.06
SNCA-201ENST00000336904 RPS3AP61247 264 aaKnown RBP8.4□□□□□ -1.06
SNCA-201ENST00000336904 SLC35A2P78381 396 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 ITGADQ13349 1161 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 VEZF1Q14119 521 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 MYBPC3Q14896 1274 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 CTF1Q16619 201 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 ANKRD54Q6NXT1 300 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 TRIM40Q6P9F5 258 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 ENPP7Q6UWV6 458 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 SLCO6A1Q86UG4 719 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 GALNT13Q8IUC8 556 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 GPR32P1Q8NGA4 272 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 OR2A1Q8NGT9 310 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 NRBF2Q96F24 287 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 TIMMDC1Q9NPL8 285 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 ETAA1Q9NY74 926 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 TBC1D29Q9UFV1 150 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms