RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 OR13F1Q8NGS4 319 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.86□□□□□ -1.152e-7■■■□□ 19.1
HPS4-201ENST00000336873 GRHL3Q8TE85 626 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 PIGKQ92643 395 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 TMEM19Q96HH6 336 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 HHIPL1Q96JK4 782 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 CCDC3Q9BQI4 270 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 NTMT1Q9BV86 223 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 SLC29A3Q9BZD2 475 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 INIPQ9NRY2 104 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 GULP1Q9UBP9 304 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 NDOR1Q9UHB4 597 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 SH2B3Q9UQQ2 575 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 PLEKHM1Q9Y4G2 1056 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 EP300Q09472 2414 aaPredicted RBP7.86□□□□□ -1.15
HPS4-201ENST00000336873 TMEM189-UBE2V1I3L0A0 370 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 PI15O43692 258 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 AP1G1O43747 822 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 PRAMEF10O60809 474 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 SERPINB7O75635 380 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 TIMP2P16035 220 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 TYRP1P17643 537 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 CD22P20273 847 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 TMBIM6P55061 237 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 GP2P55259 537 aaKnown RBP7.86□□□□□ -1.15
HPS4-201ENST00000336873 MTAPQ13126 283 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 RAB33AQ14088 237 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 LRRC32Q14392 662 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 PTGES3Q15185 160 aaKnown RBP7.86□□□□□ -1.15
HPS4-201ENST00000336873 ZNF385BQ569K4 471 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 ZNF805Q5CZA5 627 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 C10orf62Q5T681 223 aaPredicted RBP7.86□□□□□ -1.15
HPS4-201ENST00000336873 ATAD3BQ5T9A4 648 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 PAQR6Q6TCH4 344 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 TMEM107Q6UX40 140 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 TMPRSS11AQ6ZMR5 421 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 GPR149Q86SP6 731 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 SLC39A11Q8N1S5 342 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 CADM2Q8N3J6 435 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 SCAIQ8N9R8 606 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 OR9A1PQ8NGU1 263 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 USP7Q93009 1102 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 ZFP3Q96NJ6 502 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 MBOAT4Q96T53 435 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 CPPED1Q9BRF8 314 aaPredicted RBP7.86□□□□□ -1.15
HPS4-201ENST00000336873 TBC1D14Q9P2M4 693 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 SSR3Q9UNL2 185 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 PCDHGA10Q9Y5H3 936 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 CFAP54Q96N23 3096 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 TLR4O00206 839 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 ARNTLO00327 626 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 SCAMP2O15127 329 aaKnown RBP7.86□□□□□ -1.15
HPS4-201ENST00000336873 YY2O15391 372 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 PRKNO60260 465 aaPredicted RBP7.86□□□□□ -1.15
HPS4-201ENST00000336873 NUDT14O95848 222 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 NR2F6P10588 404 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 BMP4P12644 408 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 ZNF12P17014 697 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 CSTF2P33240 577 aaKnown RBP eCLIP7.86□□□□□ -1.15
HPS4-201ENST00000336873 ACTR1BP42025 376 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 NRIP1P48552 1158 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 SLC9A3P48764 834 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 ACTR1AP61163 376 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 BTN3A2P78410 334 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 GRIK2Q13002 908 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 MAD2L1BPQ15013 274 aaPredicted RBP7.86□□□□□ -1.15
HPS4-201ENST00000336873 OR2G6Q5TZ20 316 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 C6orf120Q7Z4R8 191 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 DPP10Q8N608 796 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 B3GNT7Q8NFL0 401 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 ZNF420Q8TAQ5 688 aaPredicted RBP7.86□□□□□ -1.15
HPS4-201ENST00000336873 UCN3Q969E3 161 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 OMA1Q96E52 524 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 ZNF347Q96SE7 839 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 TTYH2Q9BSA4 534 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 DSN1Q9H410 356 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 DPEP2Q9H4A9 486 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 CCNB1IP1Q9NPC3 277 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 TMEM184CQ9NVA4 438 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 FAM120CQ9NX05 1096 aaKnown RBP7.86□□□□□ -1.15
HPS4-201ENST00000336873 IL37Q9NZH6 218 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 CLEC2DQ9UHP7 191 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 FNDC1Q4ZHG4 1894 aaPredicted RBP7.85□□□□□ -1.15
HPS4-201ENST00000336873 PSMD9O00233 223 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 NRG2O14511 850 aaPredicted RBP7.85□□□□□ -1.15
HPS4-201ENST00000336873 SLC22A1O15245 554 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 PRNPP04156 253 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 C1GALT1C1LP0DN25 315 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 CST5P28325 142 aaPredicted RBP7.85□□□□□ -1.15
HPS4-201ENST00000336873 RCVRNP35243 200 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 GPR4P46093 362 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 GINS1Q14691 196 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 DEFB134Q4QY38 66 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 UBE2UQ5VVX9 321 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 CCBE1Q6UXH8 406 aaPredicted RBP7.85□□□□□ -1.15
HPS4-201ENST00000336873 SLC39A5Q6ZMH5 540 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 FAM92BQ6ZTR7 304 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 PLEKHM3Q6ZWE6 761 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 ZNF433Q8N7K0 673 aaPredicted RBP7.85□□□□□ -1.15
HPS4-201ENST00000336873 PLA2G15Q8NCC3 412 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms