RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 ZNF223Q9UK11 482 aaPredicted RBP16.5■□□□□ 0.23
CMTM1-204ENST00000336328 PKDREJQ9NTG1 2253 aa16.49■□□□□ 0.23
CMTM1-204ENST00000336328 LDB3O75112 727 aa16.49■□□□□ 0.23
CMTM1-204ENST00000336328 CLDN14O95500 239 aa16.49■□□□□ 0.23
CMTM1-204ENST00000336328 PTGER4P35408 488 aa16.49■□□□□ 0.23
CMTM1-204ENST00000336328 SLC7A5Q01650 507 aa16.49■□□□□ 0.23
CMTM1-204ENST00000336328 SLAMF1Q13291 335 aa16.49■□□□□ 0.23
CMTM1-204ENST00000336328 SETDB1Q15047 1291 aa16.49■□□□□ 0.23
CMTM1-204ENST00000336328 UAP1Q16222 522 aaPredicted RBP16.49■□□□□ 0.23
CMTM1-204ENST00000336328 PFKFB4Q16877 469 aa16.49■□□□□ 0.23
CMTM1-204ENST00000336328 RNFT1Q5M7Z0 435 aa16.49■□□□□ 0.23
CMTM1-204ENST00000336328 TMEM211Q6ICI0 200 aa16.49■□□□□ 0.23
CMTM1-204ENST00000336328 ADNP2Q6IQ32 1131 aa16.49■□□□□ 0.23
CMTM1-204ENST00000336328 OPN5Q6U736 354 aa16.49■□□□□ 0.23
CMTM1-204ENST00000336328 IL20RBQ6UXL0 311 aa16.49■□□□□ 0.23
CMTM1-204ENST00000336328 DOLPP1Q86YN1 238 aa16.49■□□□□ 0.23
CMTM1-204ENST00000336328 MYLK4Q86YV6 388 aaPredicted RBP16.49■□□□□ 0.23
CMTM1-204ENST00000336328 AGAP11Q8TF27 550 aa16.49■□□□□ 0.23
CMTM1-204ENST00000336328 KCTD4Q8WVF5 259 aa16.49■□□□□ 0.23
CMTM1-204ENST00000336328 MRRFQ96E11 262 aaKnown RBP16.49■□□□□ 0.23
CMTM1-204ENST00000336328 CSF3RQ99062 836 aa16.49■□□□□ 0.23
CMTM1-204ENST00000336328 RPF2Q9H7B2 306 aaKnown RBP16.49■□□□□ 0.23
CMTM1-204ENST00000336328 SNX15Q9NRS6 342 aa16.49■□□□□ 0.23
CMTM1-204ENST00000336328 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.49■□□□□ 0.23
CMTM1-204ENST00000336328 COQ3Q9NZJ6 369 aa16.49■□□□□ 0.23
CMTM1-204ENST00000336328 TMCO1Q9UM00 188 aa16.49■□□□□ 0.23
CMTM1-204ENST00000336328 IKBKGQ9Y6K9 419 aa16.49■□□□□ 0.23
CMTM1-204ENST00000336328 A0A096LPK6 155 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 ACOT7O00154 380 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 RBP1P09455 135 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 MTHFD2P13995 350 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 COX6B1P14854 86 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 BUD31P41223 144 aaPredicted RBP16.48■□□□□ 0.23
CMTM1-204ENST00000336328 SERPINB8P50452 374 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 RNF4P78317 190 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 ADORA2A-AS1P86434 159 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 TBL3Q12788 808 aaKnown RBP16.48■□□□□ 0.23
CMTM1-204ENST00000336328 DDX39BQ13838 428 aaKnown RBP16.48■□□□□ 0.23
CMTM1-204ENST00000336328 PCBP2Q15366 365 aaKnown RBP eCLIP16.48■□□□□ 0.239e-7■■■■□ 24.1
CMTM1-204ENST00000336328 WHAMMP3Q1A5X7 153 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 ARHGAP11AQ6P4F7 1023 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 ZNF793Q6ZN11 406 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 TAOK1Q7L7X3 1001 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 MDGA2Q7Z553 956 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 GPR180Q86V85 440 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 RELL1Q8IUW5 271 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 MCEMP1Q8IX19 187 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 ZCCHC7Q8N3Z6 543 aaKnown RBP16.48■□□□□ 0.23
CMTM1-204ENST00000336328 PSD4Q8NDX1 1056 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 HUS1BQ8NHY5 278 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 SLC2A12Q8TD20 617 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 MTFMTQ96DP5 389 aaKnown RBP16.48■□□□□ 0.23
CMTM1-204ENST00000336328 DGAT2Q96PD7 388 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 RASL10BQ96S79 203 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 PELOQ9BRX2 385 aaKnown RBP16.48■□□□□ 0.23
CMTM1-204ENST00000336328 LRRC1Q9BTT6 524 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 OR51B5Q9H339 312 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 ZDHHC18Q9NUE0 388 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 ASB1Q9Y576 335 aa16.48■□□□□ 0.23
CMTM1-204ENST00000336328 NCOA6Q14686 2063 aaPredicted RBP16.47■□□□□ 0.23
CMTM1-204ENST00000336328 H0YIV9 168 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 WWP2O00308 870 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 RTCAO00442 366 aaKnown RBP16.47■□□□□ 0.23
CMTM1-204ENST00000336328 HS6ST1O60243 411 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 KLK8O60259 260 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 SH3BGRLO75368 114 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 URI1O94763 535 aaPredicted RBP16.47■□□□□ 0.23
CMTM1-204ENST00000336328 CNR1P21554 472 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 STT3AP46977 705 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 HK2P52789 917 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 PLGLB1Q02325 96 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 GTF2H2Q13888 395 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 MPEG1Q2M385 716 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 NDUFAF5Q5TEU4 345 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 GTF2H2CQ6P1K8 395 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 RTL4Q6ZR62 310 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 GK5Q6ZS86 529 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 SLC22A16Q86VW1 577 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 SRRM1Q8IYB3 904 aaKnown RBP16.47■□□□□ 0.23
CMTM1-204ENST00000336328 CENPLQ8N0S6 344 aaPredicted RBP16.47■□□□□ 0.23
CMTM1-204ENST00000336328 C17orf53Q8N3J3 647 aaPredicted RBP16.47■□□□□ 0.23
CMTM1-204ENST00000336328 GOLM1Q8NBJ4 401 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 MNS1Q8NEH6 495 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 FAM57AQ8TBR7 257 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 ATP6V1E2Q96A05 226 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 ANKRD9Q96BM1 317 aaPredicted RBP16.47■□□□□ 0.23
CMTM1-204ENST00000336328 PHF12Q96QT6 1004 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 ACSS3Q9H6R3 686 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 IPPKQ9H8X2 491 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 WDR41Q9HAD4 459 aa16.47■□□□□ 0.23
CMTM1-204ENST00000336328 LYARQ9NX58 379 aaKnown RBP16.47■□□□□ 0.23
CMTM1-204ENST00000336328 A0A1B0GTH9 108 aa16.46■□□□□ 0.23
CMTM1-204ENST00000336328 ESYT3A0FGR9 886 aa16.46■□□□□ 0.23
CMTM1-204ENST00000336328 TMEM200CA6NKL6 621 aa16.46■□□□□ 0.23
CMTM1-204ENST00000336328 FOXE1O00358 373 aaPredicted RBP16.46■□□□□ 0.23
CMTM1-204ENST00000336328 PRKNO60260 465 aaPredicted RBP16.46■□□□□ 0.23
CMTM1-204ENST00000336328 CDC40O60508 579 aaKnown RBP eCLIP16.46■□□□□ 0.23
CMTM1-204ENST00000336328 TPOP07202 933 aa16.46■□□□□ 0.23
CMTM1-204ENST00000336328 INHBAP08476 426 aa16.46■□□□□ 0.23
CMTM1-204ENST00000336328 GMPRP36959 345 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms