RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 KIAA0907Q7Z7F0 614 aaPredicted RBP14.64□□□□□ -0.07
BRCC3-201ENST00000330045 ATCAYQ86WG3 371 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 LRRC56Q8IYG6 542 aaPredicted RBP14.64□□□□□ -0.07
BRCC3-201ENST00000330045 MMP21Q8N119 569 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 FAM46DQ8NEK8 389 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 SP7Q8TDD2 431 aaPredicted RBP14.64□□□□□ -0.07
BRCC3-201ENST00000330045 TDP1Q9NUW8 608 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 TAAR2Q9P1P5 351 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 KCND3Q9UK17 655 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 CAB39Q9Y376 341 aaPredicted RBP14.64□□□□□ -0.07
BRCC3-201ENST00000330045 LILRB5O75023 590 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 WEE1P30291 646 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 ETV6P41212 452 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 DGKEP52429 567 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 BCL7AQ4VC05 210 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 FAM180BQ6P0A1 224 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 CEACAM20Q6UY09 585 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 IKBIPQ70UQ0 350 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 CLIP4Q8N3C7 705 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 ZNF366Q8N895 744 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 PDXPQ96GD0 296 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 LRIG1Q96JA1 1093 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 SORBS1Q9BX66 1292 aaKnown RBP14.64□□□□□ -0.07
BRCC3-201ENST00000330045 NUAK2Q9H093 628 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 OR2AG1Q9H205 316 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 CXorf36Q9H7Y0 433 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 CCDC177Q9NQR7 707 aaPredicted RBP14.64□□□□□ -0.07
BRCC3-201ENST00000330045 ICKQ9UPZ9 632 aa14.64□□□□□ -0.07
BRCC3-201ENST00000330045 MN1Q10571 1320 aaPredicted RBP14.63□□□□□ -0.07
BRCC3-201ENST00000330045 CARNS1A5YM72 827 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 FAM227AF5H4B4 570 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 ARHGAP33O14559 1287 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 FFAR1O14842 300 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 MOSPD3O75425 235 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 SLC15A1P46059 708 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 LIM2P55344 173 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 TP53BP2Q13625 1128 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 TEAD2Q15562 447 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.63□□□□□ -0.07
BRCC3-201ENST00000330045 PARS2Q7L3T8 475 aaKnown RBP14.63□□□□□ -0.07
BRCC3-201ENST00000330045 VN1R2Q8NFZ6 395 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 UBE2E3Q969T4 207 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 EHD3Q9NZN3 535 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 TRBV4-1A0A0J9YWV2 114 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 C5orf58C9J3I9 102 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 SNX4O95219 450 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 PIPP12273 146 aaPredicted RBP14.63□□□□□ -0.07
BRCC3-201ENST00000330045 ALDH9A1P49189 494 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 DEFA1P59665 94 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 DEFA3P59666 94 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 SSX1Q16384 188 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 LEXMQ3ZCV2 418 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 RPS26P11Q5JNZ5 115 aaPredicted RBP14.63□□□□□ -0.07
BRCC3-201ENST00000330045 DEPDC1Q5TB30 811 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 TMEM53Q6P2H8 277 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 CCBE1Q6UXH8 406 aaPredicted RBP14.63□□□□□ -0.07
BRCC3-201ENST00000330045 TMIGD1Q6UXZ0 262 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 CCDC190Q86UF4 302 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 HCAR2Q8TDS4 363 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 DTD2Q96FN9 168 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 TRNT1Q96Q11 434 aaKnown RBP14.63□□□□□ -0.07
BRCC3-201ENST00000330045 IL4I1Q96RQ9 567 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 ZCCHC2Q9C0B9 1178 aaKnown RBP14.63□□□□□ -0.07
BRCC3-201ENST00000330045 SPATA7Q9P0W8 599 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 POU2F3Q9UKI9 436 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 TMCC3Q9ULS5 477 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 TSC22D4Q9Y3Q8 395 aa14.63□□□□□ -0.07
BRCC3-201ENST00000330045 DSPPQ9NZW4 1301 aa14.62□□□□□ -0.07
BRCC3-201ENST00000330045 LOC110117498-PIK3R3F6TDL0 507 aa14.62□□□□□ -0.07
BRCC3-201ENST00000330045 PSMD11O00231 422 aa14.62□□□□□ -0.07
BRCC3-201ENST00000330045 KMOO15229 486 aa14.62□□□□□ -0.07
BRCC3-201ENST00000330045 ASNA1O43681 348 aa14.62□□□□□ -0.07
BRCC3-201ENST00000330045 ENTPD6O75354 484 aa14.62□□□□□ -0.07
BRCC3-201ENST00000330045 SOD1P00441 154 aa14.62□□□□□ -0.07
BRCC3-201ENST00000330045 GDPD3Q7L5L3 318 aa14.62□□□□□ -0.07
BRCC3-201ENST00000330045 APOBEC4Q8WW27 367 aaKnown RBP14.62□□□□□ -0.07
BRCC3-201ENST00000330045 HERVK_113Q902F9 699 aa14.62□□□□□ -0.07
BRCC3-201ENST00000330045 PIK3R3Q92569 461 aa14.62□□□□□ -0.07
BRCC3-201ENST00000330045 COQ10AQ96MF6 247 aa14.62□□□□□ -0.07
BRCC3-201ENST00000330045 KCNS3Q9BQ31 491 aa14.62□□□□□ -0.07
BRCC3-201ENST00000330045 TAPBPLQ9BX59 468 aa14.62□□□□□ -0.07
BRCC3-201ENST00000330045 UCK2Q9BZX2 261 aa14.62□□□□□ -0.07
BRCC3-201ENST00000330045 SLC25A19Q9HC21 320 aa14.62□□□□□ -0.07
BRCC3-201ENST00000330045 C11orf16Q9NQ32 467 aa14.62□□□□□ -0.07
BRCC3-201ENST00000330045 NOTCH4Q99466 2003 aa14.62□□□□□ -0.07
BRCC3-201ENST00000330045 TLR4O00206 839 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 KPNA3O00505 521 aaPredicted RBP14.61□□□□□ -0.07
BRCC3-201ENST00000330045 CTDSP2O14595 271 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 PI15O43692 258 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 GPX5O75715 221 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 ADAP00813 363 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 BCHEP06276 602 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 OSMP13725 252 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 RPS26P62854 115 aaKnown RBP14.61□□□□□ -0.07
BRCC3-201ENST00000330045 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.61□□□□□ -0.07
BRCC3-201ENST00000330045 DOC2BQ14184 412 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 BCL2A1Q16548 175 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 TNFAIP8L2Q6P589 184 aaPredicted RBP14.61□□□□□ -0.07
BRCC3-201ENST00000330045 PSRC1Q6PGN9 363 aaPredicted RBP14.61□□□□□ -0.07
BRCC3-201ENST00000330045 VN1R5Q7Z5H4 357 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms