RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 EVPLLA8MZ36 301 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 EMC8O43402 210 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 ASNA1O43681 348 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 HS6ST1O60243 411 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 SNX3O60493 162 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 PRAMEF10O60809 474 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 IFNA14P01570 189 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 ATP1B1P05026 303 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 ZGLP1P0C6A0 271 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 LINC00032P0C843 101 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 BCKDHAP12694 445 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 KRT20P35900 424 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 DLSTP36957 453 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 XCR1P46094 333 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 PLA2G16P53816 162 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 NRG3P56975 720 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 MAP4K2Q12851 820 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 HKDC1Q2TB90 917 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 C18orf21Q32NC0 220 aaPredicted RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 GALNTL6Q49A17 601 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 FRMPD2BQ6IN97 320 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 C16orf89Q6UX73 402 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 CPEB2Q7Z5Q1 589 aaKnown RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 B3GNT8Q7Z7M8 397 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 DTX1Q86Y01 620 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 LIX1Q8N485 282 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 ENDOVQ8N8Q3 282 aaKnown RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 GALNT6Q8NCL4 622 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 STT3BQ8TCJ2 826 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 KLHL29Q96CT2 875 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 HSPBAP1Q96EW2 488 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 CCDC115Q96NT0 180 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 DUSP26Q9BV47 211 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 SPATA5L1Q9BVQ7 753 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 NUF2Q9BZD4 464 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 NPHS2Q9NP85 383 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 ATP13A2Q9NQ11 1180 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 PNPOQ9NVS9 261 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 TMEM9Q9P0T7 183 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 C3orf18Q9UK00 162 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 ADAM21Q9UKJ8 722 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 LIPT1Q9Y234 373 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 MAN2B2Q9Y2E5 1009 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 PTRH2Q9Y3E5 179 aaKnown RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 CCL27Q9Y4X3 112 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 POLR3HQ9Y535 204 aaPredicted RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 TIMM22Q9Y584 194 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 B3GALT1Q9Y5Z6 326 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 LOC105369274A0A096LPK9 316 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 A0A0A6YYC8 382 aaPredicted RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 LOC102723532A0A0G2JNH3 316 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 I3L1I5 382 aaPredicted RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 UBFD1O14562 309 aaKnown RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 FOXS1O43638 330 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 ITM2AO43736 263 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 RDH16O75452 317 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 ZFAND5O76080 213 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 PDE9AO76083 593 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 SNRPB2P08579 225 aaKnown RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 UQCRC2P22695 453 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 TPP2P29144 1249 aaPredicted RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 HNRNPH1P31943 449 aaKnown RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 GCKP35557 465 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 CLCN2P51788 898 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 GUCY1A3Q02108 690 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 RBBP4Q09028 425 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 HYAL2Q12891 473 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 SLC13A2Q13183 592 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 CAMK2BQ13554 666 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 ELOAQ14241 798 aaKnown RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 NKG7Q16617 165 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 DNAL1Q4LDG9 190 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 INTS11Q5TA45 600 aaKnown RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 NDUFAF5Q5TEU4 345 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 FAM47EQ6ZV65 393 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 GALNT12Q8IXK2 581 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 OR4N4Q8N0Y3 316 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 KDF1Q8NAX2 398 aaPredicted RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 GOT1L1Q8NHS2 421 aaPredicted RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 PSMA8Q8TAA3 256 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 NUBPLQ8TB37 319 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 NAT14Q8WUY8 206 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 NR4A3Q92570 626 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 ESAMQ96AP7 390 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 TM4SF18Q96CE8 201 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 C11orf24Q96F05 449 aaPredicted RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 PRR11Q96HE9 360 aaPredicted RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 LRRC37BQ96QE4 947 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 LMF1Q96S06 567 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 HOPXQ9BPY8 73 aaPredicted RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 MRPL1Q9BYD6 325 aaKnown RBP4.87□□□□□ -1.63
LRIT3-201ENST00000327908 TRIM15Q9C019 465 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 CLMPQ9H6B4 373 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 EFCAB1Q9HAE3 211 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 MMP25Q9NPA2 562 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 NTMQ9P121 344 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 TCFL5Q9UL49 500 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 DLGAP4Q9Y2H0 992 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 FIS1Q9Y3D6 152 aa4.87□□□□□ -1.63
LRIT3-201ENST00000327908 NUP210LQ5VU65 1888 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms