RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 AP1S2P56377 157 aa14.62□□□□□ -0.07
VARS2-201ENST00000321897 RGS8P57771 180 aaPredicted RBP14.62□□□□□ -0.07
VARS2-201ENST00000321897 CCSAPQ6IQ19 270 aaPredicted RBP14.62□□□□□ -0.07
VARS2-201ENST00000321897 GAREM2Q75VX8 874 aa14.62□□□□□ -0.07
VARS2-201ENST00000321897 LRRC70Q7Z2Q7 622 aa14.62□□□□□ -0.07
VARS2-201ENST00000321897 PAPD5Q8NDF8 572 aaKnown RBP14.62□□□□□ -0.07
VARS2-201ENST00000321897 IKZF5Q9H5V7 419 aa14.62□□□□□ -0.07
VARS2-201ENST00000321897 SPHK2Q9NRA0 654 aa14.62□□□□□ -0.07
VARS2-201ENST00000321897 LHX3Q9UBR4 397 aa14.62□□□□□ -0.07
VARS2-201ENST00000321897 SCO1O75880 301 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 SAGP10523 405 aaPredicted RBP14.61□□□□□ -0.07
VARS2-201ENST00000321897 IHHQ14623 411 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 RPS26P11Q5JNZ5 115 aaPredicted RBP14.61□□□□□ -0.07
VARS2-201ENST00000321897 SBSNQ6UWP8 590 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 TMEM175Q9BSA9 504 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 GSDMCQ9BYG8 508 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 RBCK1Q9BYM8 510 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 PCDHA9Q9Y5H5 950 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 THSD7AQ9UPZ6 1657 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 A0A1B0GW55 424 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 WASH4PA8MWX3 477 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 SMAD9O15198 467 aaKnown RBP14.61□□□□□ -0.07
VARS2-201ENST00000321897 DUX4L2P0CJ85 424 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 DUX4L3P0CJ86 424 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 DUX4L4P0CJ87 422 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 DUX4L5P0CJ88 424 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 DUX4L6P0CJ89 424 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 DUX4L7P0CJ90 424 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 ADH5P11766 374 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 HRH2P25021 359 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 CXCR2P25025 360 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 RPL34P49207 117 aaKnown RBP14.61□□□□□ -0.07
VARS2-201ENST00000321897 ADARB1P78563 741 aaKnown RBP14.61□□□□□ -0.07
VARS2-201ENST00000321897 DEFA5Q01523 94 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 MGAT3Q09327 533 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 GALNT1Q10472 559 aaPredicted RBP14.61□□□□□ -0.07
VARS2-201ENST00000321897 LRIT3Q3SXY7 679 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 PRSS48Q7RTY5 328 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 MARCH9Q86YJ5 346 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 CCDC116Q8IYX3 515 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 CPA6Q8N4T0 437 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 MEIOBQ8N635 442 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 GAL3ST1Q99999 423 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 FAIM2Q9BWQ8 316 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 GULP1Q9UBP9 304 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 DUX4Q9UBX2 424 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 TMEM202A6NGA9 273 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 RLN1P04808 185 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 EPCAMP16422 314 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 ANXA11P50995 505 aaKnown RBP14.61□□□□□ -0.07
VARS2-201ENST00000321897 GRSF1Q12849 480 aaKnown RBP eCLIP14.61□□□□□ -0.075e-13■■□□□ 11.5
VARS2-201ENST00000321897 BRAT1Q6PJG6 821 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 WDR53Q7Z5U6 358 aaPredicted RBP14.61□□□□□ -0.07
VARS2-201ENST00000321897 ISL2Q96A47 359 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 CMTM7Q96FZ5 175 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 CSF3RQ99062 836 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 KLF16Q9BXK1 252 aaPredicted RBP14.61□□□□□ -0.07
VARS2-201ENST00000321897 NANSQ9NR45 359 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 LRRC72A6NJI9 287 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 PI15O43692 258 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 ANXA8P13928 327 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 TNFSF8P32971 234 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 LIPAP38571 399 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 MAP2K3P46734 347 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 HNMTP50135 292 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 CRB2Q5IJ48 1285 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 OR4E2Q8NGC2 313 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 PEX13Q92968 403 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 NEIL2Q969S2 332 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 MAELQ96JY0 434 aaKnown RBP14.61□□□□□ -0.07
VARS2-201ENST00000321897 KCTD7Q96MP8 289 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 ZNF583Q96ND8 569 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 QRFPRQ96P65 431 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 KCNH6Q9H252 994 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 CMAHPQ9Y471 501 aa14.61□□□□□ -0.07
VARS2-201ENST00000321897 IQCMA0A1B0GVH7 501 aa14.6□□□□□ -0.07
VARS2-201ENST00000321897 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.6□□□□□ -0.07
VARS2-201ENST00000321897 ARHGEF33A8MVX0 844 aa14.6□□□□□ -0.07
VARS2-201ENST00000321897 PDPK1O15530 556 aa14.6□□□□□ -0.07
VARS2-201ENST00000321897 FRS3O43559 492 aa14.6□□□□□ -0.07
VARS2-201ENST00000321897 OR5F1O95221 314 aa14.6□□□□□ -0.07
VARS2-201ENST00000321897 PPIBP23284 216 aaKnown RBP14.6□□□□□ -0.07
VARS2-201ENST00000321897 DSTNP60981 165 aa14.6□□□□□ -0.07
VARS2-201ENST00000321897 HEPACAMQ14CZ8 416 aa14.6□□□□□ -0.07
VARS2-201ENST00000321897 SLC35F1Q5T1Q4 408 aa14.6□□□□□ -0.07
VARS2-201ENST00000321897 SHFQ7M4L6 423 aa14.6□□□□□ -0.07
VARS2-201ENST00000321897 Q8N402 240 aa14.6□□□□□ -0.07
VARS2-201ENST00000321897 SLC5A8Q8N695 610 aa14.6□□□□□ -0.07
VARS2-201ENST00000321897 ZNF433Q8N7K0 673 aaPredicted RBP14.6□□□□□ -0.07
VARS2-201ENST00000321897 TEX47Q8TBZ9 253 aa14.6□□□□□ -0.07
VARS2-201ENST00000321897 VMP1Q96GC9 406 aa14.6□□□□□ -0.07
VARS2-201ENST00000321897 NEDD4LQ96PU5 975 aa14.6□□□□□ -0.07
VARS2-201ENST00000321897 CARS2Q9HA77 564 aaKnown RBP14.6□□□□□ -0.07
VARS2-201ENST00000321897 STOML2Q9UJZ1 356 aa14.6□□□□□ -0.07
VARS2-201ENST00000321897 TEX46H3BTG2 121 aa14.6□□□□□ -0.07
VARS2-201ENST00000321897 FXYD1O00168 92 aa14.6□□□□□ -0.07
VARS2-201ENST00000321897 OR10H2O60403 315 aa14.6□□□□□ -0.07
VARS2-201ENST00000321897 IGLV3-25P01717 112 aa14.6□□□□□ -0.07
VARS2-201ENST00000321897 SPNP16150 400 aa14.6□□□□□ -0.07
VARS2-201ENST00000321897 CLCN7P51798 805 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms