RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 FKBP10Q96AY3 582 aa13.51□□□□□ -0.25
VRK3-201ENST00000316763 PITX2Q99697 317 aa13.51□□□□□ -0.25
VRK3-201ENST00000316763 TIMM29Q9BSF4 260 aa13.51□□□□□ -0.25
VRK3-201ENST00000316763 ZDHHC5Q9C0B5 715 aa13.51□□□□□ -0.25
VRK3-201ENST00000316763 TMEM38AQ9H6F2 299 aa13.51□□□□□ -0.25
VRK3-201ENST00000316763 GALNT8Q9NY28 637 aa13.51□□□□□ -0.25
VRK3-201ENST00000316763 ERVK-18Q9QC07 812 aa13.51□□□□□ -0.25
VRK3-201ENST00000316763 ASF1AQ9Y294 204 aa13.51□□□□□ -0.25
VRK3-201ENST00000316763 HS3ST3A1Q9Y663 406 aa13.51□□□□□ -0.25
VRK3-201ENST00000316763 ABCA7Q8IZY2 2146 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 hCG_2014768A0A024R1R8 64 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 H0Y8X5 98 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 TNFRSF11BO00300 401 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 RGS10O43665 173 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 KCNJ13O60928 360 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 TNFRSF21O75509 655 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 INMTO95050 263 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 RPN2P04844 631 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 KLK1P06870 262 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 ETFAP13804 333 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 DDX5P17844 614 aaKnown RBP13.5□□□□□ -0.25
VRK3-201ENST00000316763 HTR1BP28222 390 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 RRM2P31350 389 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 GP2P55259 537 aaKnown RBP13.5□□□□□ -0.25
VRK3-201ENST00000316763 RAB15P59190 212 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 RPP38P78345 283 aaKnown RBP13.5□□□□□ -0.25
VRK3-201ENST00000316763 SLC35A2P78381 396 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 MVKQ03426 396 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 NFATC4Q14934 902 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 ZNF630Q2M218 657 aaPredicted RBP13.5□□□□□ -0.25
VRK3-201ENST00000316763 PROX2Q3B8N5 592 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 IQCCQ4KMZ1 466 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 TMIGD1Q6UXZ0 262 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 SLC30A8Q8IWU4 369 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 DRAXINQ8NBI3 349 aaPredicted RBP13.5□□□□□ -0.25
VRK3-201ENST00000316763 ZNF540Q8NDQ6 660 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 FAR1Q8WVX9 515 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 FGF22Q9HCT0 170 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 TAS2R9Q9NYW1 312 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 FBXO4Q9UKT5 387 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 CA5BQ9Y2D0 317 aa13.5□□□□□ -0.25
VRK3-201ENST00000316763 A0A1W2PRB8 838 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 SAP18O00422 153 aaKnown RBP13.49□□□□□ -0.25
VRK3-201ENST00000316763 TOR1BO14657 336 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 FOXD2O60548 495 aaPredicted RBP13.49□□□□□ -0.25
VRK3-201ENST00000316763 GBAP04062 536 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 INHBBP09529 407 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 NUDT1P36639 197 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 HSD17B2P37059 387 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 YPEL5P62699 121 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 COX20Q5RI15 118 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 CCDC80Q76M96 950 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 ABI3BPQ7Z7G0 1075 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 WDR5BQ86VZ2 330 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 DCUN1D3Q8IWE4 304 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 HSPBAP1Q96EW2 488 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 CSF3RQ99062 836 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 GPR174Q9BXC1 333 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 GABARAPL3Q9BY60 117 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 PALMDQ9NP74 551 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 ACSL5Q9ULC5 683 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 PCDHGA10Q9Y5H3 936 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 PRSS38A1L453 326 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 PRAMEF26H0Y7S4 382 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 TNFRSF10CO14798 259 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 BCAS1O75363 584 aaPredicted RBP13.49□□□□□ -0.25
VRK3-201ENST00000316763 ANXA8P13928 327 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 CXCR2P25025 360 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 MVDP53602 400 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 CRYBA2P53672 197 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 MC1RQ01726 317 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 MEF2AQ02078 507 aaPredicted RBP13.49□□□□□ -0.25
VRK3-201ENST00000316763 OCA2Q04671 838 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 TPRG1LQ5T0D9 272 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 C16orf87Q6PH81 154 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 SLC16A12Q6ZSM3 486 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 C17orf64Q86WR6 236 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 NATD1Q8N6N6 113 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 NFKBIDQ8NI38 313 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 TANKQ92844 425 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 CIDECQ96AQ7 238 aaPredicted RBP13.49□□□□□ -0.25
VRK3-201ENST00000316763 PPP1R14BQ96C90 147 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 HRASLS5Q96KN8 279 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 MIEF1Q9NQG6 463 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 NDUFAF4Q9P032 175 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 ANGPT4Q9Y264 503 aa13.49□□□□□ -0.25
VRK3-201ENST00000316763 WBP11Q9Y2W2 641 aaKnown RBP13.49□□□□□ -0.25
VRK3-201ENST00000316763 ANKDD1BA6NHY2 528 aa13.48□□□□□ -0.25
VRK3-201ENST00000316763 SLC22A1O15245 554 aa13.48□□□□□ -0.25
VRK3-201ENST00000316763 GCM2O75603 506 aaPredicted RBP13.48□□□□□ -0.25
VRK3-201ENST00000316763 ACP5P13686 325 aa13.48□□□□□ -0.25
VRK3-201ENST00000316763 SOAT1P35610 550 aa13.48□□□□□ -0.25
VRK3-201ENST00000316763 ST13P50502 369 aaKnown RBP13.48□□□□□ -0.25
VRK3-201ENST00000316763 CDK6Q00534 326 aa13.48□□□□□ -0.25
VRK3-201ENST00000316763 ARHGAP19Q14CB8 494 aa13.48□□□□□ -0.25
VRK3-201ENST00000316763 ANGPT1Q15389 498 aa13.48□□□□□ -0.25
VRK3-201ENST00000316763 PRSS48Q7RTY5 328 aa13.48□□□□□ -0.25
VRK3-201ENST00000316763 P3H2Q8IVL5 708 aa13.48□□□□□ -0.25
VRK3-201ENST00000316763 TRUB1Q8WWH5 349 aaKnown RBP13.48□□□□□ -0.25
VRK3-201ENST00000316763 GEMIN6Q8WXD5 167 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms