RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 ASB4Q9Y574 426 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 LYVE1Q9Y5Y7 322 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 ENPP4Q9Y6X5 453 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 MAN2B1O00754 1011 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 HAT1O14929 419 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 IGLV3-19P01714 112 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 NDUFV2P19404 249 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 ATP5A1P25705 553 aaKnown RBP13.22□□□□□ -0.29
VAMP2-201ENST00000316509 PEBP1P30086 187 aaKnown RBP13.22□□□□□ -0.29
VAMP2-201ENST00000316509 SLC5A2P31639 672 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 CLK3P49761 638 aaKnown RBP13.22□□□□□ -0.29
VAMP2-201ENST00000316509 PLA2G16P53816 162 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 TMBIM6P55061 237 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 TEKQ02763 1124 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 NPRL3Q12980 569 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 SLAMF1Q13291 335 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 PMS2P3Q13401 168 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 MICAQ29983 383 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 TSEN54Q7Z6J9 526 aaKnown RBP13.22□□□□□ -0.29
VAMP2-201ENST00000316509 PAQR7Q86WK9 346 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 CLVS1Q8IUQ0 354 aaPredicted RBP13.22□□□□□ -0.29
VAMP2-201ENST00000316509 TDHQ8IZJ6 230 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 MMP21Q8N119 569 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 FAM174AQ8TBP5 190 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 EXOSC8Q96B26 276 aaKnown RBP13.22□□□□□ -0.29
VAMP2-201ENST00000316509 ZNF607Q96SK3 696 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 RIBC2Q9H4K1 309 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 CCNB1IP1Q9NPC3 277 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 POFUT2Q9Y2G5 429 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 DGKBQ9Y6T7 804 aa13.22□□□□□ -0.29
VAMP2-201ENST00000316509 FAM221BA6H8Z2 402 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 SLC1A7O00341 560 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 TNFSF14O43557 240 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 SH3BP5O60239 455 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 SEC14L2O76054 403 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 DIRAS1O95057 198 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 F3P13726 295 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 XCR1P46094 333 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 RABIFP47224 123 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 CLDN2P57739 230 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 SRP54P61011 504 aaKnown RBP13.21□□□□□ -0.29
VAMP2-201ENST00000316509 IL5RAQ01344 420 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 RGS1Q08116 209 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 RAB39AQ14964 217 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 CTU2Q2VPK5 515 aaKnown RBP13.21□□□□□ -0.29
VAMP2-201ENST00000316509 TOR1AIP1Q5JTV8 583 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 ANKRD34AQ69YU3 496 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 FAM92BQ6ZTR7 304 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 FAM124AQ86V42 546 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 SPARTQ8N0X7 666 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 ACOT4Q8N9L9 421 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 OR13F1Q8NGS4 319 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 RPLP0P6Q8NHW5 317 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 ISOC1Q96CN7 298 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 AMDHD1Q96NU7 426 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 BARD1Q99728 777 aaKnown RBP13.21□□□□□ -0.29
VAMP2-201ENST00000316509 C17orf62Q9BQA9 187 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 SPATA5L1Q9BVQ7 753 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 SRMSQ9H3Y6 488 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 GIMAP4Q9NUV9 329 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 TEX10Q9NXF1 929 aaPredicted RBP13.21□□□□□ -0.29
VAMP2-201ENST00000316509 PSME2Q9UL46 239 aa13.21□□□□□ -0.29
VAMP2-201ENST00000316509 A6NCN8 305 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 URADA6NGE7 173 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 OR5K4A6NMS3 321 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 PRAMEF26H0Y7S4 382 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 ERI3O43414 337 aaKnown RBP13.21□□□□□ -0.3
VAMP2-201ENST00000316509 NOL3O60936 208 aaKnown RBP13.21□□□□□ -0.3
VAMP2-201ENST00000316509 MITFO75030 526 aaPredicted RBP13.21□□□□□ -0.3
VAMP2-201ENST00000316509 SERPINB7O75635 380 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 TNFP01375 233 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 ACSL1P33121 698 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 RAPSNQ13702 412 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 PRAMEF8Q5VWM4 474 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 PRAMEF7Q5VXH5 474 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 TMEM92Q6UXU6 159 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 ZNF793Q6ZN11 406 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 PLD3Q8IV08 490 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 SAMD14Q8IZD0 417 aaPredicted RBP13.21□□□□□ -0.3
VAMP2-201ENST00000316509 HORMAD2Q8N7B1 307 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 SLC38A5Q8WUX1 472 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 IPCEF1Q8WWN9 437 aaPredicted RBP13.21□□□□□ -0.3
VAMP2-201ENST00000316509 GAL3ST3Q96A11 431 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 HRASLS5Q96KN8 279 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 BBS4Q96RK4 519 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 KLHL31Q9H511 634 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 POLMQ9NP87 494 aaPredicted RBP13.21□□□□□ -0.3
VAMP2-201ENST00000316509 SPHK1Q9NYA1 384 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 USP36Q9P275 1121 aaKnown RBP13.21□□□□□ -0.3
VAMP2-201ENST00000316509 ZNF624Q9P2J8 865 aaPredicted RBP13.21□□□□□ -0.3
VAMP2-201ENST00000316509 RAB23Q9ULC3 237 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 KLK4Q9Y5K2 254 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 ENTPD2Q9Y5L3 495 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 COL4A2P08572 1712 aa13.21□□□□□ -0.3
VAMP2-201ENST00000316509 TRIM64BA6NI03 449 aa13.2□□□□□ -0.3
VAMP2-201ENST00000316509 ZW10O43264 779 aa13.2□□□□□ -0.3
VAMP2-201ENST00000316509 ANGPTL1O95841 491 aa13.2□□□□□ -0.3
VAMP2-201ENST00000316509 IFNW1P05000 195 aa13.2□□□□□ -0.3
VAMP2-201ENST00000316509 ITIH1P19827 911 aa13.2□□□□□ -0.3
VAMP2-201ENST00000316509 ACTR1BP42025 376 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms