RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 KCT2Q8NC54 265 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 DGCR14Q96DF8 476 aaKnown RBP17.41■□□□□ 0.38
CCDC43-201ENST00000315286 TWSG1Q9GZX9 223 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 GLIPR2Q9H4G4 154 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 WSB2Q9NYS7 404 aaPredicted RBP17.41■□□□□ 0.38
CCDC43-201ENST00000315286 NDUFAF4Q9P032 175 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 PDP1Q9P0J1 537 aaPredicted RBP17.41■□□□□ 0.38
CCDC43-201ENST00000315286 FBXW2Q9UKT8 454 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 A0A087WXM4 84 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 LOC100130705A0A1B0GUX0 176 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 TRIM64CA6NLI5 447 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 VILLO15195 856 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 BMP10O95393 424 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 CELA2BP08218 269 aaPredicted RBP17.4■□□□□ 0.38
CCDC43-201ENST00000315286 POLR2CP19387 275 aaPredicted RBP17.4■□□□□ 0.38
CCDC43-201ENST00000315286 MAGP20916 626 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 IGFBP5P24593 272 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 YAP1P46937 504 aaKnown RBP17.4■□□□□ 0.38
CCDC43-201ENST00000315286 OR1E2P47887 323 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 ALDH3B2P48448 385 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 CCT3P49368 545 aaKnown RBP17.4■□□□□ 0.38
CCDC43-201ENST00000315286 ARFIP1P53367 373 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 RAD23AP54725 363 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 EIF2B5Q13144 721 aaKnown RBP17.4■□□□□ 0.38
CCDC43-201ENST00000315286 ELOAQ14241 798 aaKnown RBP17.4■□□□□ 0.38
CCDC43-201ENST00000315286 MLC1Q15049 377 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 CYP27C1Q4G0S4 372 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 DGLUCYQ7Z3D6 616 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 THAP5Q7Z6K1 395 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 GALNT5Q7Z7M9 940 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 C8orf59Q8N0T1 100 aaPredicted RBP17.4■□□□□ 0.38
CCDC43-201ENST00000315286 OR10G6Q8NH81 332 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 PSMA8Q8TAA3 256 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 RLN3Q8WXF3 142 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 TMIGD2Q96BF3 282 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 NRBF2Q96F24 287 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 AMDHD1Q96NU7 426 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 RBM38Q9H0Z9 239 aaKnown RBP17.4■□□□□ 0.38
CCDC43-201ENST00000315286 RUBCNLQ9H714 662 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 LMAN1LQ9HAT1 526 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 THUMPD1Q9NXG2 353 aaKnown RBP17.4■□□□□ 0.38
CCDC43-201ENST00000315286 ANGPT4Q9Y264 503 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 PCDHGA8Q9Y5G5 932 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 PCDHGA2Q9Y5H1 932 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 SLCO1B1Q9Y6L6 691 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 NINQ8N4C6 2090 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 OR6C74A6NCV1 312 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 PRAMEF25A6NGN4 478 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 DPM1O60762 260 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 VIPP01282 170 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 UGT2B7P16662 529 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 STXBP1P61764 594 aaKnown RBP17.4■□□□□ 0.38
CCDC43-201ENST00000315286 RPS15AP62244 130 aaKnown RBP17.4■□□□□ 0.38
CCDC43-201ENST00000315286 SKIV2LQ15477 1246 aaKnown RBP17.4■□□□□ 0.38
CCDC43-201ENST00000315286 RFX4Q33E94 735 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 IFI44LQ53G44 452 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 C18orf63Q68DL7 685 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 FAM160A2Q8N612 972 aaPredicted RBP17.4■□□□□ 0.38
CCDC43-201ENST00000315286 SRFBP1Q8NEF9 429 aaKnown RBP17.4■□□□□ 0.38
CCDC43-201ENST00000315286 SLC38A5Q8WUX1 472 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 LZICQ8WZA0 190 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 RAB8BQ92930 207 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 YTHDF1Q9BYJ9 559 aaKnown RBP17.4■□□□□ 0.38
CCDC43-201ENST00000315286 ING2Q9H160 280 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 TUBA8Q9NY65 449 aaPredicted RBP17.4■□□□□ 0.38
CCDC43-201ENST00000315286 RAB23Q9ULC3 237 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 ORC6Q9Y5N6 252 aa17.4■□□□□ 0.38
CCDC43-201ENST00000315286 SPTY2D1-AS1A0A0U1RR47 76 aa17.39■□□□□ 0.37
CCDC43-201ENST00000315286 GSAPA4D1B5 854 aa17.39■□□□□ 0.37
CCDC43-201ENST00000315286 OR2A25A4D2G3 310 aa17.39■□□□□ 0.37
CCDC43-201ENST00000315286 ERAL1O75616 437 aaKnown RBP17.39■□□□□ 0.37
CCDC43-201ENST00000315286 THEGLP0DJG4 465 aa17.39■□□□□ 0.37
CCDC43-201ENST00000315286 GAS6Q14393 721 aa17.39■□□□□ 0.37
CCDC43-201ENST00000315286 LRIT3Q3SXY7 679 aa17.39■□□□□ 0.37
CCDC43-201ENST00000315286 ZC3H12BQ5HYM0 836 aaKnown RBP17.39■□□□□ 0.37
CCDC43-201ENST00000315286 KDM4DQ6B0I6 523 aa17.39■□□□□ 0.37
CCDC43-201ENST00000315286 REEP3Q6NUK4 255 aa17.39■□□□□ 0.37
CCDC43-201ENST00000315286 ZNF687Q8N1G0 1237 aa17.39■□□□□ 0.37
CCDC43-201ENST00000315286 SMYD1Q8NB12 490 aa17.39■□□□□ 0.37
CCDC43-201ENST00000315286 ACTR10Q9NZ32 417 aa17.39■□□□□ 0.37
CCDC43-201ENST00000315286 CPNE7Q9UBL6 633 aa17.39■□□□□ 0.37
CCDC43-201ENST00000315286 CA14Q9ULX7 337 aa17.39■□□□□ 0.37
CCDC43-201ENST00000315286 DMTF1Q9Y222 760 aa17.39■□□□□ 0.37
CCDC43-201ENST00000315286 B4GAT1O43505 415 aa17.38■□□□□ 0.37
CCDC43-201ENST00000315286 SH3BP5O60239 455 aa17.38■□□□□ 0.37
CCDC43-201ENST00000315286 GUCY1B2O75343 617 aa17.38■□□□□ 0.37
CCDC43-201ENST00000315286 AIFM1O95831 613 aa17.38■□□□□ 0.37
CCDC43-201ENST00000315286 ETS2P15036 469 aa17.38■□□□□ 0.37
CCDC43-201ENST00000315286 CD6P30203 668 aa17.38■□□□□ 0.37
CCDC43-201ENST00000315286 GSTT1P30711 240 aa17.38■□□□□ 0.37
CCDC43-201ENST00000315286 RRM2P31350 389 aa17.38■□□□□ 0.37
CCDC43-201ENST00000315286 PTGER1P34995 402 aa17.38■□□□□ 0.37
CCDC43-201ENST00000315286 NCBP2P52298 156 aaKnown RBP eCLIP17.38■□□□□ 0.37
CCDC43-201ENST00000315286 SNRPNP63162 240 aaKnown RBP17.38■□□□□ 0.37
CCDC43-201ENST00000315286 BTN3A2P78410 334 aa17.38■□□□□ 0.37
CCDC43-201ENST00000315286 TP53BP2Q13625 1128 aa17.38■□□□□ 0.37
CCDC43-201ENST00000315286 FZD2Q14332 565 aa17.38■□□□□ 0.37
CCDC43-201ENST00000315286 ZNF750Q32MQ0 723 aa17.38■□□□□ 0.37
CCDC43-201ENST00000315286 ASPGQ86U10 573 aa17.38■□□□□ 0.37
CCDC43-201ENST00000315286 SLC44A2Q8IWA5 706 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms