RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 GPRC5BQ9NZH0 403 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 MED11Q9P086 117 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 RGS17Q9UGC6 210 aaPredicted RBP13.2□□□□□ -0.3
SPAST-201ENST00000315285 DBIP07108 87 aaKnown RBP13.2□□□□□ -0.3
SPAST-201ENST00000315285 FHP07954 510 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 ITGA3P26006 1051 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 AKR1D1P51857 326 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 NCS1P62166 190 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 SLAMF1Q13291 335 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 RAB33AQ14088 237 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 GRM2Q14416 872 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 FAM214AQ32MH5 1076 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 C4orf46Q504U0 113 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 GID4Q8IVV7 300 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 SDR16C5Q8N3Y7 309 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 OR52N2Q8NGI0 321 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 NEIL3Q8TAT5 605 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 SMURF1Q9HCE7 757 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 BAIAP2Q9UQB8 552 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 LIPT1Q9Y234 373 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 ZNF860A6NHJ4 632 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 DCKP27707 260 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 GJA5P36382 358 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 MAGEA3P43357 314 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 CBX5P45973 191 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 NRG3P56975 720 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 DECR1Q16698 335 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 C17orf99Q6UX52 265 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 COMMD6Q7Z4G1 85 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 HMGN2P46Q86SG4 172 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.2□□□□□ -0.3
SPAST-201ENST00000315285 CBARPQ8N350 705 aaPredicted RBP13.2□□□□□ -0.3
SPAST-201ENST00000315285 DRAXINQ8NBI3 349 aaPredicted RBP13.2□□□□□ -0.3
SPAST-201ENST00000315285 CEP76Q8TAP6 659 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 ATOH8Q96SQ7 321 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 SLC2A11Q9BYW1 496 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 C14orf119Q9NWQ9 140 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 CDH10Q9Y6N8 788 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 PLCH1Q4KWH8 1693 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 NPIPB15A6NHN6 443 aaPredicted RBP13.2□□□□□ -0.3
SPAST-201ENST00000315285 POLR2CP19387 275 aaPredicted RBP13.2□□□□□ -0.3
SPAST-201ENST00000315285 PRRT3Q5FWE3 981 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 PRSS48Q7RTY5 328 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 SLC5A8Q8N695 610 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 CHST14Q8NCH0 376 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 NUP43Q8NFH3 380 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 OR2T33Q8NG76 320 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 SUN3Q8TAQ9 357 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.2□□□□□ -0.39e-7■■■■□ 23.5
SPAST-201ENST00000315285 ARRDC2Q8TBH0 407 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 COQ8BQ96D53 544 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 FUZQ9BT04 418 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 ACTL8Q9H568 366 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 CENPMQ9NSP4 180 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 GPR83Q9NYM4 423 aa13.2□□□□□ -0.3
SPAST-201ENST00000315285 EMC8O43402 210 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 SLC10A3P09131 477 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 MAZP56270 477 aaKnown RBP13.19□□□□□ -0.3
SPAST-201ENST00000315285 GTF2IRD2BQ6EKJ0 949 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 CEP68Q76N32 757 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 GTF2IRD2Q86UP8 949 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 OR2L5Q8NG80 312 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 B3GNT4Q9C0J1 378 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 STOX2Q9P2F5 926 aaPredicted RBP13.19□□□□□ -0.3
SPAST-201ENST00000315285 BLOC1S5-TXNDC5H3BN57 136 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 OXSR1O95747 527 aaPredicted RBP13.19□□□□□ -0.3
SPAST-201ENST00000315285 HOXD8P13378 290 aaPredicted RBP13.19□□□□□ -0.3
SPAST-201ENST00000315285 CPOXP36551 454 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 ZXDBP98169 803 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 CDKL4Q5MAI5 379 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 GRHL2Q6ISB3 625 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 TMEM25Q86YD3 366 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 NRSN1Q8IZ57 195 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 TSTD1Q8NFU3 115 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 LRRC20Q8TCA0 184 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 PHOSPHO1Q8TCT1 267 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 VILLO15195 856 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 C6P13671 934 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 POU6F2P78424 691 aaPredicted RBP13.19□□□□□ -0.3
SPAST-201ENST00000315285 GSTM4Q03013 218 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 PGM2L1Q6PCE3 622 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 ZNF782Q6ZMW2 699 aaPredicted RBP13.19□□□□□ -0.3
SPAST-201ENST00000315285 GALNT7Q86SF2 657 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 CLEC14AQ86T13 490 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 GPALPP1Q8IXQ4 340 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 DNAJA4Q8WW22 397 aaPredicted RBP13.19□□□□□ -0.3
SPAST-201ENST00000315285 OR2M4Q96R27 311 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 SECISBP2Q96T21 854 aaKnown RBP13.19□□□□□ -0.3
SPAST-201ENST00000315285 SARDHQ9UL12 918 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 HCN2Q9UL51 889 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 C1orf226A1L170 272 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 ANHXE9PGG2 379 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 H3BMQ9 156 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 BOLA2-SMG1P6H3BVE0 249 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 ZNF33BQ06732 778 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 KCTD11Q693B1 232 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 LHFPL3Q86UP9 236 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 CCDC107Q8WV48 283 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 LRR1Q96L50 414 aa13.19□□□□□ -0.3
SPAST-201ENST00000315285 COG8Q96MW5 612 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms