RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 EGFL8Q99944 293 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 SERHL2Q9H4I8 314 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 THUMPD1Q9NXG2 353 aaKnown RBP9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 B3GNT2Q9NY97 397 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 PCDHGB6Q9Y5F9 930 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 MTCH2Q9Y6C9 303 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 RFXANKO14593 260 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 OR7A10O76100 309 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 CLDN9O95484 217 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 ADRB3P13945 408 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 ATP1B2P14415 290 aaPredicted RBP9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 ZNF30P17039 623 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 GPX2P18283 190 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 GTF2E2P29084 291 aaKnown RBP9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 ERP29P30040 261 aaKnown RBP9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 GGT2P36268 569 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 RPS5P46782 204 aaKnown RBP9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 CTSCP53634 463 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 CNTN1Q12860 1018 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 IQCCQ4KMZ1 466 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 SGO1Q5FBB7 561 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 MACC1Q6ZN28 852 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 DPPA4Q7L190 304 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 DGLUCYQ7Z3D6 616 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 TECPR1Q7Z6L1 1165 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 SLC22A15Q8IZD6 547 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 CADM2Q8N3J6 435 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 DNAJC22Q8N4W6 341 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 NELL1Q92832 810 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 CMTM7Q96FZ5 175 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 CRELD1Q96HD1 420 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 ZNF578Q96N58 590 aaPredicted RBP9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 CCDC32Q9BV29 185 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 ACPTQ9BZG2 426 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 ZNF556Q9HAH1 456 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 THAP10Q9P2Z0 257 aaPredicted RBP9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 ATP6V1HQ9UI12 483 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 DLGAP4Q9Y2H0 992 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 KLK4Q9Y5K2 254 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 CSNK1G3Q9Y6M4 447 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 STON1Q9Y6Q2 735 aa9.87□□□□□ -0.83
APOBEC3F-201ENST00000308521 PLXNB3Q9ULL4 1909 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 OR5K4A6NMS3 321 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 CLCA1A8K7I4 914 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 MID1O15344 667 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 KCNK5O95279 499 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 PBLDP30039 288 aaPredicted RBP9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 UGT2B15P54855 530 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 MTAPQ13126 283 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 VEZF1Q14119 521 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 EIF4HQ15056 248 aaKnown RBP9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 CARTPTQ16568 116 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 DUOXA1Q1HG43 343 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 CDKL4Q5MAI5 379 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 HENMT1Q5T8I9 393 aaKnown RBP9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 SHEQ5VZ18 495 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 GPR155Q7Z3F1 870 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 SYTL1Q8IYJ3 562 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 GGHQ92820 318 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 LRIG1Q96JA1 1093 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 HSH2DQ96JZ2 352 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 COL21A1Q96P44 957 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 SPATA9Q9BWV2 254 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 TRIM39Q9HCM9 518 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 DYRK4Q9NR20 520 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 SIRT5Q9NXA8 310 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 FBXL12Q9NXK8 326 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 GPRC5BQ9NZH0 403 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 SPASTQ9UBP0 616 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 EIF3KQ9UBQ5 218 aaKnown RBP9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 SERGEFQ9UGK8 458 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 PPT2Q9UMR5 302 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 TRAPPC4Q9Y296 219 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 TRPM6Q9BX84 2022 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 TSPAN11A1L157 253 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 SERTM1A2A2V5 107 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 LZTS3O60299 673 aaPredicted RBP9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 APODP05090 189 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 IL7P13232 177 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 ALOX12P18054 663 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 P2RY2P41231 377 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 SLC19A1P41440 591 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 OLR1P78380 273 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 SLC14A1Q13336 389 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 ZNF284Q2VY69 593 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 GGTA1PQ4G0N0 100 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 LYPLAL1Q5VWZ2 237 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 KIAA1211LQ6NV74 962 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 MAMSTRQ6ZN01 415 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 CREB3L2Q70SY1 520 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 CCDC190Q86UF4 302 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 LRRC20Q8TCA0 184 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 ZNF675Q8TD23 568 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 KLK6Q92876 244 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 SH3KBP1Q96B97 665 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 MYOCQ99972 504 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 C19orf43Q9BQ61 176 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 TIGARQ9NQ88 270 aa9.86□□□□□ -0.83
APOBEC3F-201ENST00000308521 PAQR5Q9NXK6 330 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms