RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 YPEL5P62699 121 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 ABCA11PQ4W5N1 156 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 GPR107Q5VW38 600 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 GDPD4Q6W3E5 623 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 CPXM2Q8N436 756 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 IRF7Q92985 503 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 TMEM125Q96AQ2 219 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 BRINP2Q9C0B6 783 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 ABCB9Q9NP78 766 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 CYTH4Q9UIA0 394 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 TAAR5O14804 337 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 SRPX2O60687 465 aaPredicted RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 TBX10O75333 385 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 ITGB2P05107 769 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 CTXN2P0C2S0 81 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 CLCN3P51790 818 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 YIF1BQ5BJH7 314 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 ADAMTS14Q8WXS8 1223 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 IMP4Q96G21 291 aaKnown RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 PGLYRP2Q96PD5 576 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 GPR174Q9BXC1 333 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 RPF2Q9H7B2 306 aaKnown RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 POLR3BQ9NW08 1133 aaPredicted RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 KIR2DS5A0A0G2JLQ3 304 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 A0A0G2JNG1 304 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 hCG_1809904A0A1W2PP81 198 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 A0A1W2PPE2 198 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 A0A1W2PR64 198 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 A0A1W2PRV1 198 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 KIR2DS3K7RE56 304 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 CBX6O95503 412 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 TNFP01375 233 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 TPT1P13693 172 aaKnown RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 CCR10P46092 362 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 ZNF133P52736 654 aaPredicted RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 ERVK-21P61565 698 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 LASP1Q14847 261 aaKnown RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 KIR2DS5Q14953 304 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 C15orf59Q2T9L4 293 aaPredicted RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 ZMAT1Q5H9K5 638 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 TMEM205Q6UW68 189 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 TRIM74Q86UV6 250 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 TRIM73Q86UV7 250 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 C1orf127Q8N9H9 656 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 OR9A4Q8NGU2 314 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 SLC9A6Q92581 669 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 DPH2Q9BQC3 489 aaPredicted RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 BIN3Q9NQY0 253 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 COG5Q9UP83 839 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 PRRC2BQ5JSZ5 2229 aaKnown RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 DOCK5Q9H7D0 1870 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 NT5C1B-RDH14C9J2C7 533 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 CSTBP04080 98 aaKnown RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 SEPHS1P49903 392 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 MLLT11Q13015 90 aaPredicted RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 C15orf39Q6ZRI6 1047 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 CARM1Q86X55 608 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 CDH26Q8IXH8 852 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 LIX1Q8N485 282 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 NPLQ9BXD5 320 aaPredicted RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 ULBP1Q9BZM6 244 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 THSD1Q9NS62 852 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 PPP4R1LQ9P1A2 415 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 RAI2Q9Y5P3 530 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 SYT5O00445 386 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 XPNPEP2O43895 674 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 PRAMEF2O60811 474 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 STT3BQ8TCJ2 826 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 COQ8BQ96D53 544 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 ATF6BQ99941 703 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 C1QTNF3Q9BXJ4 246 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 DGCR6LQ9BY27 220 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 SACM1LQ9NTJ5 587 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 TSTD3H0UI37 97 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 DCLK1O15075 740 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 HLA-DQA2P01906 255 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 DBIP07108 87 aaKnown RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 HK1P19367 917 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 BDKRB1P46663 353 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 NPRL3Q12980 569 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 REP15Q6BDI9 236 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 PDZD7Q9H5P4 517 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 TESQ9UGI8 421 aaKnown RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 IL36AQ9UHA7 158 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 MOSPD1Q9UJG1 213 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 ADRB2P07550 413 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 DLSTP36957 453 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 PTGIRP43119 386 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 PUDPQ08623 228 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 COTL1Q14019 142 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 ZNF805Q5CZA5 627 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 ZFAND4Q86XD8 727 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 STEAP2Q8NFT2 490 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 RSPRY1Q96DX4 576 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 EBF3Q9H4W6 596 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 SCPEP1Q9HB40 452 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 TMEM212A6NML5 194 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 EI24O14681 340 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 AQP9O43315 295 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 S100A8P05109 93 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms