RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 CTAGE9A4FU28 777 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 GOLGA6L22H0YM25 854 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 TLX2O43763 284 aaPredicted RBP10.83□□□□□ -0.68
SMIM4-201ENST00000307106 TRAPPC6AO75865 159 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 C1QAP02745 245 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 TP53P04637 393 aaPredicted RBP10.83□□□□□ -0.68
SMIM4-201ENST00000307106 C8GP07360 202 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 TNNI3P19429 210 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 SAT1P21673 171 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 MGAT1P26572 445 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 NR1H2P55055 460 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 CTBP1Q13363 440 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 RCAN2Q14206 197 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 CSHL1Q14406 222 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 PIGGQ5H8A4 983 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 VASNQ6EMK4 673 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 ZNF549Q6P9A3 640 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 PALM2Q8IXS6 379 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 ZNF595Q8IYB9 648 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 MEIOBQ8N635 442 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 SLC22A8Q8TCC7 542 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 NEIL2Q969S2 332 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 SPACA9Q96E40 222 aaPredicted RBP10.83□□□□□ -0.68
SMIM4-201ENST00000307106 FAR2Q96K12 515 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 ZNF597Q96LX8 424 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 DOHHQ9BU89 302 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 SFXN3Q9BWM7 321 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 NPLQ9BXD5 320 aaPredicted RBP10.83□□□□□ -0.68
SMIM4-201ENST00000307106 AICDAQ9GZX7 198 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 CALHM2Q9HA72 323 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 PARVBQ9HBI1 364 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 ZNF226Q9NYT6 803 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 CNIH4Q9P003 139 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 VTI1BQ9UEU0 232 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 SLC6A5Q9Y345 797 aa10.83□□□□□ -0.68
SMIM4-201ENST00000307106 A0A087X1B8 175 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 C17orf105B2RV13 164 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 RNF223E7ERA6 249 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 AP3B1O00203 1094 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 EIF3FO00303 357 aaPredicted RBP10.82□□□□□ -0.68
SMIM4-201ENST00000307106 SOX30O94993 753 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 LRATO95237 230 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 SERPINA6P08185 405 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 HIST1H2AGP0C0S8 130 aaPredicted RBP10.82□□□□□ -0.68
SMIM4-201ENST00000307106 PAX1P15863 534 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 HIST1H2ADP20671 130 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 CPOXP36551 454 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 MC3RP41968 323 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 NAP1L1P55209 391 aaKnown RBP10.82□□□□□ -0.68
SMIM4-201ENST00000307106 REEP5Q00765 189 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 STX4Q12846 297 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 RBBP5Q15291 538 aaKnown RBP10.82□□□□□ -0.68
SMIM4-201ENST00000307106 OASLQ15646 514 aaKnown RBP10.82□□□□□ -0.68
SMIM4-201ENST00000307106 KRTAP24-1Q3LI83 254 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 CHRFAM7AQ494W8 412 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 ZNF470Q6ECI4 717 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 LRRC8EQ6NSJ5 796 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 NEPROQ6NW34 567 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 LYPD8Q6UX82 237 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 ZNF441Q8N8Z8 693 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 FAM13CQ8NE31 585 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 OR10G3Q8NGC4 313 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 OR56A3Q8NH54 315 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 GABPB2Q8TAK5 448 aaPredicted RBP10.82□□□□□ -0.68
SMIM4-201ENST00000307106 NUBPLQ8TB37 319 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 SLC5A11Q8WWX8 675 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 WDYHV1Q96HA8 205 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 HIST1H2AHQ96KK5 128 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 RUNDC3BQ96NL0 473 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 WFIKKN1Q96NZ8 548 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 HS3ST6Q96QI5 342 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 CSF3RQ99062 836 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 HIST1H2AJQ99878 128 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 H2AFJQ9BTM1 129 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 ALOXE3Q9BYJ1 711 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 EIF2B3Q9NR50 452 aaKnown RBP10.82□□□□□ -0.68
SMIM4-201ENST00000307106 FBXO6Q9NRD1 293 aaPredicted RBP10.82□□□□□ -0.68
SMIM4-201ENST00000307106 YAE1D1Q9NRH1 226 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 KLHL28Q9NXS3 571 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 PAK5Q9P286 719 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 COPS7AQ9UBW8 275 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 SOX13Q9UN79 622 aa10.82□□□□□ -0.68
SMIM4-201ENST00000307106 A8MXE2 369 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 LIASO43766 372 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 B3GALT2O43825 422 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 CTNSO60931 367 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 ACSL3O95573 720 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 PAMP19021 973 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 CRYGSP22914 178 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 SLCO1A2P46721 670 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 ATP5J2P56134 94 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 STXBP1P61764 594 aaKnown RBP10.81□□□□□ -0.68
SMIM4-201ENST00000307106 DHX9Q08211 1270 aaKnown RBP10.81□□□□□ -0.68
SMIM4-201ENST00000307106 SP140Q13342 867 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 NHSL2Q5HYW2 709 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 WIPI1Q5MNZ9 446 aaPredicted RBP10.81□□□□□ -0.68
SMIM4-201ENST00000307106 DCST1Q5T197 706 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 DUPD1Q68J44 220 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 PLEKHM3Q6ZWE6 761 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 DENND6AQ8IWF6 608 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms