RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 DOHHQ9BU89 302 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 NLNQ9BYT8 704 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 TMEM245Q9H330 911 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 FAM83DQ9H4H8 585 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 SCN2AQ99250 2005 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 DRGXA6NNA5 263 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 C12orf71A8MTZ7 269 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 CSTF2P33240 577 aaKnown RBP eCLIP13.93□□□□□ -0.18
PTPN9-201ENST00000306726 HTR7P34969 479 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 LMAN2Q12907 356 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 ARSIQ5FYB1 569 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 MMAAQ8IVH4 418 aaKnown RBP13.93□□□□□ -0.18
PTPN9-201ENST00000306726 DNAJC22Q8N4W6 341 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 GOLM1Q8NBJ4 401 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 TMEM98Q9Y2Y6 226 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 MEIOCA2RUB1 952 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 ISM1B1AKI9 464 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 GPX5O75715 221 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 NPPAP01160 153 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 AVPR1BP47901 424 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 KCNC4Q03721 635 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 BTBD16Q32M84 506 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 CEP78Q5JTW2 689 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 CCDC149Q6ZUS6 474 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 CSGALNACT1Q8TDX6 532 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 SMAP2Q8WU79 429 aaPredicted RBP13.93□□□□□ -0.18
PTPN9-201ENST00000306726 NEIL2Q969S2 332 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 YIPF6Q96EC8 236 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 NMNAT1Q9HAN9 279 aaPredicted RBP13.93□□□□□ -0.18
PTPN9-201ENST00000306726 NDUFAF4Q9P032 175 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 SNX11Q9Y5W9 270 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 IL3P08700 152 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 XKP51811 444 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 ZNF791Q3KP31 576 aaPredicted RBP13.92□□□□□ -0.18
PTPN9-201ENST00000306726 DCST1Q5T197 706 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 PTOV1Q86YD1 416 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 AOAHP28039 575 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 MAN2A2P49641 1150 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 SMSP52788 366 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 SRSF11Q05519 484 aaKnown RBP13.92□□□□□ -0.18
PTPN9-201ENST00000306726 SPHARQ15513 63 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 C9orf50Q5SZB4 431 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 IDNKQ5T6J7 187 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 RAET1GQ6H3X3 334 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 TRIM40Q6P9F5 258 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 SLC30A8Q8IWU4 369 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 C17orf50Q8WW18 174 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 ASZ1Q8WWH4 475 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 TSSK6Q9BXA6 273 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 PTGFRNQ9P2B2 879 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 CRNNQ9UBG3 495 aaPredicted RBP13.92□□□□□ -0.18
PTPN9-201ENST00000306726 PCDHB11Q9Y5F2 797 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 KIAA1671Q9BY89 1806 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 FAM183AA6NL82 134 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 HAT1O14929 419 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 SLC16A6O15403 523 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 NUPL2O15504 423 aaKnown RBP13.92□□□□□ -0.18
PTPN9-201ENST00000306726 SLITRK5O94991 958 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 MYL9P24844 172 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 SCN1BQ07699 218 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 AGAP6Q5VW22 663 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 RD3Q7Z3Z2 195 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 ZNF683Q8IZ20 524 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 OR8H3Q8N146 312 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 AGAP4Q96P64 663 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 CDCA3Q99618 268 aaPredicted RBP13.92□□□□□ -0.18
PTPN9-201ENST00000306726 PDFQ9HBH1 243 aa13.92□□□□□ -0.18
PTPN9-201ENST00000306726 CCL16O15467 120 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 SGTAO43765 313 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 CDK1P06493 297 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 SNRPD1P62314 119 aaKnown RBP13.91□□□□□ -0.18
PTPN9-201ENST00000306726 CCDC58Q4VC31 144 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 ZNF385BQ569K4 471 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 CRB2Q5IJ48 1285 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 IQCHQ86VS3 1027 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 APH1BQ8WW43 257 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 SNAPC3Q92966 411 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 RNFT2Q96EX2 444 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 CCDC120Q96HB5 630 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 FCRL4Q96PJ5 515 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 HOXD1Q9GZZ0 328 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 SUV39H2Q9H5I1 410 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 ZDHHC3Q9NYG2 299 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 LHX3Q9UBR4 397 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 ZNF639Q9UID6 485 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 CLCA2Q9UQC9 943 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 RUVBL1Q9Y265 456 aaKnown RBP13.91□□□□□ -0.18
PTPN9-201ENST00000306726 B3GNT3Q9Y2A9 372 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 ATP1B2P14415 290 aaPredicted RBP13.91□□□□□ -0.18
PTPN9-201ENST00000306726 IRF3Q14653 427 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 OR7G3Q8NG95 312 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 HMGB4Q8WW32 186 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 IPCEF1Q8WWN9 437 aaPredicted RBP13.91□□□□□ -0.18
PTPN9-201ENST00000306726 AP2M1Q96CW1 435 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 CMTM7Q96FZ5 175 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 F2RL3Q96RI0 385 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 FNDC11Q9BVV2 318 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 SLC28A3Q9HAS3 691 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 CNIH4Q9P003 139 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 H2AFY2Q9P0M6 372 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms