RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 CEPT1Q9Y6K0 416 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 OR6C74A6NCV1 312 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 XPNPEP2O43895 674 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 EIF2S1P05198 315 aaKnown RBP10.8□□□□□ -0.68
SCG2-201ENST00000305409 IGHV4-34P06331 123 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 POU2F1P14859 743 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 IL1RNP18510 177 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 CMPK1P30085 196 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 AKT2P31751 481 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 NCBP2P52298 156 aaKnown RBP eCLIP10.8□□□□□ -0.68
SCG2-201ENST00000305409 PCBP4P57723 403 aaKnown RBP10.8□□□□□ -0.68
SCG2-201ENST00000305409 PPP1CAP62136 330 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 BTN3A2P78410 334 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 EEF1A2Q05639 463 aaKnown RBP10.8□□□□□ -0.68
SCG2-201ENST00000305409 PMS2P3Q13401 168 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 GPR19Q15760 415 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 ABHD17CQ6PCB6 329 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 ZNF438Q7Z4V0 828 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 SLC38A5Q8WUX1 472 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 MTERF3Q96E29 417 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 WFDC6Q9BQY6 131 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 SERHL2Q9H4I8 314 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 EPS8L2Q9H6S3 715 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 KIR3DX1Q9H7L2 352 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 POLR1BQ9H9Y6 1135 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 PRDM7Q9NQW5 492 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 PAPOLBQ9NRJ5 636 aaKnown RBP10.8□□□□□ -0.68
SCG2-201ENST00000305409 TMEM74BQ9NUR3 256 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 RLIMQ9NVW2 624 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 KIF17Q9P2E2 1029 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 PCDHGA4Q9Y5G9 962 aa10.8□□□□□ -0.68
SCG2-201ENST00000305409 A0A087WXM4 84 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 ZNF860A6NHJ4 632 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 TMX2-CTNND1H3BSU7 103 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 ZW10O43264 779 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 CTSVO60911 334 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 OR12D1P0DN82 309 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 HIST1H1TP22492 207 aaPredicted RBP10.79□□□□□ -0.68
SCG2-201ENST00000305409 ATP5A1P25705 553 aaKnown RBP10.79□□□□□ -0.68
SCG2-201ENST00000305409 DNAJA1P31689 397 aaKnown RBP10.79□□□□□ -0.68
SCG2-201ENST00000305409 CCT3P49368 545 aaKnown RBP10.79□□□□□ -0.68
SCG2-201ENST00000305409 CDH12P55289 794 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 OLR1P78380 273 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 IL5RAQ01344 420 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 SLC9A5Q14940 896 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 ZIC1Q15915 447 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 KCTD21Q4G0X4 260 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 LAIR2Q6ISS4 152 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 KCTD8Q6ZWB6 473 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 VN1R4Q7Z5H5 301 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 TRIM69Q86WT6 500 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 TRIM48Q8IWZ4 208 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 BPIFB6Q8NFQ5 453 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 PJA1Q8NG27 643 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 XAGE5Q8WWM1 108 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 OR5P2Q8WZ92 322 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 RHNO1Q9BSD3 238 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 RAB11FIP5Q9BXF6 653 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 USE1Q9NZ43 259 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 TRPC4Q9UBN4 977 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 C3orf18Q9UK00 162 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 FAM227AF5H4B4 570 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 BCKDKO14874 412 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 KRT75O95678 551 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 AIFM1O95831 613 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 HPRP00739 348 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 F3P13726 295 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 FPR1P21462 350 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 MAOBP27338 520 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 FMO3P31513 532 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 ALDH3B2P48448 385 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 CLK3P49761 638 aaKnown RBP10.79□□□□□ -0.68
SCG2-201ENST00000305409 ARHGDIAP52565 204 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 SPIBQ01892 262 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 MYBPC3Q14896 1274 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 TEAD4Q15561 434 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 SYPL1Q16563 259 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 TTC23Q5W5X9 447 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 OR4N5Q8IXE1 308 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 CHDHQ8NE62 594 aaPredicted RBP10.79□□□□□ -0.68
SCG2-201ENST00000305409 TMEM19Q96HH6 336 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 MPP4Q96JB8 637 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 QRFPRQ96P65 431 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 BBS4Q96RK4 519 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 MAPKAP1Q9BPZ7 522 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 NPLQ9BXD5 320 aaPredicted RBP10.79□□□□□ -0.68
SCG2-201ENST00000305409 NT5DC2Q9H857 520 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 EQTNQ9NQ60 294 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 RASSF1Q9NS23 344 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 CDC14AQ9UNH5 594 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 ORC6Q9Y5N6 252 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 WDR87Q6ZQQ6 2873 aa10.79□□□□□ -0.68
SCG2-201ENST00000305409 LOC105369274A0A096LPK9 316 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 LOC102723532A0A0G2JNH3 316 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 PRAMEF27A3QJZ7 478 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 P2RX6O15547 441 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 MBTPS2O43462 519 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 MAN1A2O60476 641 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 APBB3O95704 486 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 ZNF888P0CJ79 500 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms