RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 CPN2P22792 545 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 RPS9P46781 194 aaKnown RBP13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 CHN2P52757 468 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 PRKAG1P54619 331 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 CDK6Q00534 326 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 ADRM1Q16186 407 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 ZNF630Q2M218 657 aaPredicted RBP13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 FCRL6Q6DN72 434 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 EIF3MQ7L2H7 374 aaKnown RBP13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 EPHX4Q8IUS5 362 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 MAFAQ8NHW3 353 aaPredicted RBP13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 SPPL2AQ8TCT8 520 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 HSH2DQ96JZ2 352 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 ETAA1Q9NY74 926 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 TRPC4Q9UBN4 977 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 LRP4O75096 1905 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 AQP9O43315 295 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 AIFM1O95831 613 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 FABP3P05413 133 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 C8orf89P0DMQ9 161 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 NR2F6P10588 404 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 NKG7Q16617 165 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 DEFB133Q30KQ1 61 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 BAHD1Q8TBE0 780 aaPredicted RBP13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 NT5CQ8TCD5 201 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 OR2A5Q96R48 311 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 SLAMF7Q9NQ25 335 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 CLCA2Q9UQC9 943 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 A0A1W2PR48 441 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 C4orf51C9J302 202 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 H0YGG7 62 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 UBXN7O94888 489 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 IL1RNP18510 177 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 CSNK2A2P19784 350 aaPredicted RBP13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 BCKDHBP21953 392 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 FEN1P39748 380 aaKnown RBP13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 ARF3P61204 181 aaPredicted RBP13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 C18orf63Q68DL7 685 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 DGLUCYQ7Z3D6 616 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 C6orf120Q7Z4R8 191 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 VTCN1Q7Z7D3 282 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 ST13P4Q8IZP2 240 aaPredicted RBP13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 ARL14Q8N4G2 192 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 MARVELD2Q8N4S9 558 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 FLVCR1-AS1Q8TAF5 88 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 UTP15Q8TED0 518 aaKnown RBP13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 UCN3Q969E3 161 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 IL21RQ9HBE5 538 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 ZCCHC3Q9NUD5 404 aaKnown RBP13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 MUTYHQ9UIF7 546 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 PHF11Q9UIL8 331 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 ASB4Q9Y574 426 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 U3KQV3 271 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 hCG_2039718K7EN88 272 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 PRAMEF10O60809 474 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 MPIP34949 423 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 CDK9P50750 372 aaKnown RBP13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 RPS26P62854 115 aaKnown RBP13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 CYBRD1Q53TN4 286 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 BHLHB9Q6PI77 547 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 CBLL1Q75N03 491 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 CCDC116Q8IYX3 515 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 GATA6Q92908 595 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 MAPKAP1Q9BPZ7 522 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 SMPD3Q9NY59 655 aaPredicted RBP13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 ORC6Q9Y5N6 252 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 SNX11Q9Y5W9 270 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 LOC105369274A0A096LPK9 316 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 LOC102723532A0A0G2JNH3 316 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 PGRMC2O15173 223 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 BCAT2O15382 392 aaPredicted RBP13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 ZSCAN9O15535 394 aaPredicted RBP13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 ALBP02768 609 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 OPN1SWP03999 348 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 PCBP4P57723 403 aaKnown RBP13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 VSX2P58304 361 aaPredicted RBP13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 FRMPD2BQ6IN97 320 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 SPRED1Q7Z699 444 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 OR4N4Q8N0Y3 316 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 DHRSXQ8N5I4 330 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 ZNF764Q96H86 408 aaPredicted RBP13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 SLC35G5Q96KT7 338 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 SERINC2Q96SA4 455 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 ZSCAN32Q9NX65 697 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 TAS2R7Q9NYW3 318 aa13.74□□□□□ -0.21
SHCBP1-201ENST00000303383 WASHC1A8K0Z3 465 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 ALPPL2P10696 532 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 ALOX12P18054 663 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 NAT1P18440 290 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 ANXA11P50995 505 aaKnown RBP13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 PPP1R8Q12972 351 aaKnown RBP13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 COL9A2Q14055 689 aaPredicted RBP13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 GPR153Q6NV75 609 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 ISLR2Q6UXK2 745 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 GPR155Q7Z3F1 870 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 ZNF438Q7Z4V0 828 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 SVOPLQ8N434 492 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 CSNK1A1LQ8N752 337 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 NEURL3Q96EH8 262 aa13.73□□□□□ -0.21
SHCBP1-201ENST00000303383 AMDHD1Q96NU7 426 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms