RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 GRIK2Q13002 908 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 TRAM2Q15035 370 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 TRAM1Q15629 374 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 SLC36A3Q495N2 470 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 ZNF678Q5SXM1 525 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 AMZ2Q86W34 360 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 UPF1Q92900 1129 aaKnown RBP eCLIP14.31□□□□□ -0.12
SCN3B-201ENST00000299333 MYBPHLA2RUH7 354 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 CCL16O15467 120 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 TXNDC12O95881 172 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 LRP8Q14114 963 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 VGLL4Q14135 290 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 MRPL41Q8IXM3 137 aaKnown RBP14.3□□□□□ -0.12
SCN3B-201ENST00000299333 VWA5B2Q8N398 1253 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 OR4Q3Q8NH05 313 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 NDNFQ8TB73 568 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 ARL11Q969Q4 196 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 SLC41A3Q96GZ6 507 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 NEDD4LQ96PU5 975 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 WASHC1A8K0Z3 465 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 PRSS44E7EML9 344 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 ENDOUP21128 410 aaKnown RBP14.3□□□□□ -0.12
SCN3B-201ENST00000299333 MAT2AP31153 395 aaKnown RBP14.3□□□□□ -0.12
SCN3B-201ENST00000299333 HYAL2Q12891 473 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 TIFABQ6ZNK6 161 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 PLD6Q8N2A8 252 aaKnown RBP14.3□□□□□ -0.12
SCN3B-201ENST00000299333 FRZBQ92765 325 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 RBCK1Q9BYM8 510 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 KATNBL1Q9H079 304 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 QRSL1Q9H0R6 528 aaKnown RBP14.3□□□□□ -0.12
SCN3B-201ENST00000299333 SCDO00767 359 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 AGPAT2O15120 278 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 APODP05090 189 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 ZDHHC11BP0C7U3 371 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 HOXD8P13378 290 aaPredicted RBP14.3□□□□□ -0.12
SCN3B-201ENST00000299333 GABARAPL2P60520 117 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 SGCBQ16585 318 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 REEP3Q6NUK4 255 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 CHDHQ8NE62 594 aaPredicted RBP14.3□□□□□ -0.12
SCN3B-201ENST00000299333 NLGN2Q8NFZ4 835 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 UNKLQ9H9P5 680 aaKnown RBP14.3□□□□□ -0.12
SCN3B-201ENST00000299333 UBFD1O14562 309 aaKnown RBP14.3□□□□□ -0.12
SCN3B-201ENST00000299333 TYROBPO43914 113 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 ZNF8P17098 575 aaPredicted RBP14.3□□□□□ -0.12
SCN3B-201ENST00000299333 NAA10P41227 235 aaPredicted RBP14.3□□□□□ -0.12
SCN3B-201ENST00000299333 FRKP42685 505 aaPredicted RBP14.3□□□□□ -0.12
SCN3B-201ENST00000299333 RPS13P62277 151 aaKnown RBP14.3□□□□□ -0.12
SCN3B-201ENST00000299333 SLC27A4Q6P1M0 643 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 OR8K5Q8NH50 307 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 HMX1Q9NP08 348 aaPredicted RBP14.3□□□□□ -0.12
SCN3B-201ENST00000299333 GPR83Q9NYM4 423 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 KCNS2Q9ULS6 477 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 TMEM150CB9EJG8 249 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 LDB2O43679 373 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 C7P10643 843 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 CTSOP43234 321 aaPredicted RBP14.3□□□□□ -0.12
SCN3B-201ENST00000299333 PTH2RP49190 550 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 NFATC4Q14934 902 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 ABHD13Q7L211 337 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 IGFN1Q86VF2 1251 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 NRSN1Q8IZ57 195 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 MALSU1Q96EH3 234 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 OR51B5Q9H339 312 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 ZDHHC3Q9NYG2 299 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 TAC3Q9UHF0 121 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 CYP8B1Q9UNU6 501 aa14.3□□□□□ -0.12
SCN3B-201ENST00000299333 LYRM1O43325 122 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 CERS1P27544 350 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 CTHP32929 405 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 NIPAL4Q0D2K0 466 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 CEACAM7Q14002 265 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 LASP1Q14847 261 aaKnown RBP14.29□□□□□ -0.12
SCN3B-201ENST00000299333 OR4K1Q8NGD4 311 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 CNOT9Q92600 299 aaKnown RBP14.29□□□□□ -0.12
SCN3B-201ENST00000299333 DGAT2Q96PD7 388 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 PRDM9Q9NQV7 894 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 GPATCH2Q9NW75 528 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 CACNG4Q9UBN1 327 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 PRKYO43930 277 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 GRIN3BO60391 1043 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 TFP02787 698 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 AMY2BP19961 511 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 MC2RQ01718 297 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 RIN1Q13671 783 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 C14orf28Q4W4Y0 310 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 SYPL2Q5VXT5 272 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 C7orf61Q8IZ16 206 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 THRSPQ92748 146 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 SNAPC3Q92966 411 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 NINJ1Q92982 152 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 STRA6Q9BX79 667 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 AP1M2Q9Y6Q5 423 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 RFPL3O75679 317 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 VIPR1P32241 457 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 GRIN2CQ14957 1233 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 SOWAHAQ2M3V2 549 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 HS3ST5Q8IZT8 346 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 FAM86B1Q8N7N1 296 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 TMEM185AQ8NFB2 350 aa14.29□□□□□ -0.12
SCN3B-201ENST00000299333 KLK6Q92876 244 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms