RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 HSPE1-MOB4S4R3N1 261 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 AXIN1O15169 862 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 PAPLNO95428 1278 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 GRK5P34947 590 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 NCBP2P52298 156 aaKnown RBP eCLIP11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 MRPS21P82921 87 aaKnown RBP11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 HNRNPA0Q13151 305 aaKnown RBP11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 ARFRP1Q13795 201 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 GRK1Q15835 563 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 ASTLQ6HA08 431 aaPredicted RBP11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 GOLGA7Q7Z5G4 137 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 MINDY1Q8N5J2 469 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 TXNDC5Q8NBS9 432 aaKnown RBP11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 C2CD4AQ8NCU7 369 aaPredicted RBP11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 CMTM7Q96FZ5 175 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 KMOO15229 486 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 FANCGO15287 622 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 TLX3O43711 291 aaPredicted RBP11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 RP2O75695 350 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 DIRAS1O95057 198 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 PTTG1O95997 202 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 NPR2P20594 1047 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 STC1P52823 247 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 MC1RQ01726 317 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 SEC23BQ15437 767 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 MPP7Q5T2T1 576 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 ANKRD26P1Q6NSI1 321 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 ZNF627Q7L945 461 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 NUP54Q7Z3B4 507 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 SNX29P2Q8IUI4 249 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 CILP2Q8IUL8 1156 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 PYCR2Q96C36 320 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 GAL3ST1Q99999 423 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 LINC00597Q9H2U6 94 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 MAGED1Q9Y5V3 778 aaPredicted RBP11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 ZNF701M0R085 212 aaPredicted RBP11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 PGAM2P15259 253 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 EDNRAP25101 427 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 CXCL12P48061 93 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 OR12D2P58182 307 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 VMACQ2NL98 169 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 C6orf136Q5SQH8 315 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 C10orf62Q5T681 223 aaPredicted RBP11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 SLC36A4Q6YBV0 504 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 PQLC3Q8N755 202 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 S100A16Q96FQ6 103 aaKnown RBP11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 TMEM30AQ9NV96 361 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 PAQR5Q9NXK6 330 aaPredicted RBP11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 SLC2A6Q9UGQ3 507 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 CD84Q9UIB8 345 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 MYOCOSA0A1B0GUC4 107 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 NARSO43776 548 aaKnown RBP11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 PRMT3O60678 531 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 FUT4P22083 530 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 GSTM2P28161 218 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 RPL34P49207 117 aaKnown RBP11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 NUBP1P53384 320 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 MS4A13Q5J8X5 152 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 HAGHLQ6PII5 290 aaPredicted RBP11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 PIM3Q86V86 326 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 PLD6Q8N2A8 252 aaKnown RBP11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 WDTC1Q8N5D0 677 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 GPR151Q8TDV0 419 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 ASB12Q8WXK4 309 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 PSKH2Q96QS6 385 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 ZNF382Q96SR6 550 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 CCDC32Q9BV29 185 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 EXO5Q9H790 373 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 OSER1Q9NX31 292 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 FBXO9Q9UK97 447 aaPredicted RBP11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 KIAA1671Q9BY89 1806 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 HOXC11O43248 304 aaPredicted RBP11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 MT-ND2P03891 347 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 MT-ND5P03915 603 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 MAPK3P27361 379 aaPredicted RBP11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 TNFRSF4P43489 277 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 SEC13P55735 322 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 COQ5Q5HYK3 327 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 PLEKHG7Q6ZR37 379 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 TCEANCQ8N8B7 351 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 LCN9Q8WX39 176 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 TSSK6Q9BXA6 273 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 ACTR6Q9GZN1 396 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 SMURF1Q9HCE7 757 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 NOP16Q9Y3C1 178 aaKnown RBP11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 TBC1D3DA0A087WVF3 549 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 TBC1D3IA0A087WXS9 549 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 TBC1D3EA0A087X179 549 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 TBC1D3KA0A087X1G2 549 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 TBC1D3FA6NER0 549 aaPredicted RBP11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 TBC1D3LB9A6J9 549 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 CYB5AP00167 134 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 ALDOAP04075 364 aaKnown RBP11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 BCHEP06276 602 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 TBC1D3HP0C7X1 549 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 MYF6P23409 242 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 DNASE1P24855 282 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 SLC3A1Q07837 685 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 PON3Q15166 354 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 LRRC66Q68CR7 880 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms