RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 TEAD4Q15561 434 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 SHQ1Q6PI26 577 aaKnown RBP17.03■□□□□ 0.32
CAPN1-201ENST00000279247 LPCAT2Q7L5N7 544 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 CLVS1Q8IUQ0 354 aaPredicted RBP17.03■□□□□ 0.32
CAPN1-201ENST00000279247 SHISA5Q8N114 240 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 GOT1L1Q8NHS2 421 aaPredicted RBP17.03■□□□□ 0.32
CAPN1-201ENST00000279247 UBE2FQ969M7 185 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 MTERF3Q96E29 417 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 TMEM229AB2RXF0 380 aa17.02■□□□□ 0.32
CAPN1-201ENST00000279247 H0YAE9 185 aa17.02■□□□□ 0.32
CAPN1-201ENST00000279247 BCKDKO14874 412 aa17.02■□□□□ 0.32
CAPN1-201ENST00000279247 XPNPEP2O43895 674 aa17.02■□□□□ 0.32
CAPN1-201ENST00000279247 CLEC3AO75596 197 aa17.02■□□□□ 0.32
CAPN1-201ENST00000279247 UQCRC2P22695 453 aa17.02■□□□□ 0.32
CAPN1-201ENST00000279247 GPR18Q14330 331 aa17.02■□□□□ 0.32
CAPN1-201ENST00000279247 KCTD8Q6ZWB6 473 aa17.02■□□□□ 0.32
CAPN1-201ENST00000279247 COL26A1Q96A83 441 aa17.02■□□□□ 0.32
CAPN1-201ENST00000279247 MPP4Q96JB8 637 aa17.02■□□□□ 0.32
CAPN1-201ENST00000279247 C7orf34Q96L11 122 aa17.02■□□□□ 0.32
CAPN1-201ENST00000279247 FBRSQ9HAH7 460 aa17.02■□□□□ 0.32
CAPN1-201ENST00000279247 ZCCHC3Q9NUD5 404 aaKnown RBP17.02■□□□□ 0.32
CAPN1-201ENST00000279247 APOBEC3BQ9UH17 382 aaKnown RBP17.02■□□□□ 0.32
CAPN1-201ENST00000279247 SHISA7A6NL88 538 aa17.02■□□□□ 0.32
CAPN1-201ENST00000279247 MAN1A2O60476 641 aa17.02■□□□□ 0.32
CAPN1-201ENST00000279247 DNAJA1P31689 397 aaKnown RBP17.02■□□□□ 0.32
CAPN1-201ENST00000279247 CCT3P49368 545 aaKnown RBP17.02■□□□□ 0.32
CAPN1-201ENST00000279247 OLR1P78380 273 aa17.02■□□□□ 0.32
CAPN1-201ENST00000279247 DUSP7Q16829 419 aa17.02■□□□□ 0.32
CAPN1-201ENST00000279247 KCTD21Q4G0X4 260 aa17.02■□□□□ 0.32
CAPN1-201ENST00000279247 WDR53Q7Z5U6 358 aaPredicted RBP17.02■□□□□ 0.32
CAPN1-201ENST00000279247 KRT84Q9NSB2 600 aa17.02■□□□□ 0.32
CAPN1-201ENST00000279247 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.02■□□□□ 0.32
CAPN1-201ENST00000279247 HEMK1Q9Y5R4 338 aaPredicted RBP17.02■□□□□ 0.32
CAPN1-201ENST00000279247 CABIN1Q9Y6J0 2220 aa17.02■□□□□ 0.31
CAPN1-201ENST00000279247 A0A1W2PR48 441 aa17.02■□□□□ 0.31
CAPN1-201ENST00000279247 PCSK6P29122 969 aa17.02■□□□□ 0.31
CAPN1-201ENST00000279247 FMO3P31513 532 aa17.02■□□□□ 0.31
CAPN1-201ENST00000279247 HYAL2Q12891 473 aa17.02■□□□□ 0.31
CAPN1-201ENST00000279247 ILF3Q12906 894 aaKnown RBP eCLIP17.02■□□□□ 0.31
CAPN1-201ENST00000279247 VANGL1Q8TAA9 524 aaPredicted RBP17.02■□□□□ 0.31
CAPN1-201ENST00000279247 FAM131CQ96AQ9 280 aa17.02■□□□□ 0.31
CAPN1-201ENST00000279247 ZBED6CLQ96FA7 236 aaPredicted RBP17.02■□□□□ 0.31
CAPN1-201ENST00000279247 GLIPR2Q9H4G4 154 aa17.02■□□□□ 0.31
CAPN1-201ENST00000279247 KIR3DX1Q9H7L2 352 aa17.02■□□□□ 0.31
CAPN1-201ENST00000279247 NDUFAF4Q9P032 175 aa17.02■□□□□ 0.31
CAPN1-201ENST00000279247 KLF15Q9UIH9 416 aa17.02■□□□□ 0.31
CAPN1-201ENST00000279247 PRAMEF25A6NGN4 478 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 OR12D1P0DN82 309 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 F3P13726 295 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 FPR1P21462 350 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 HIST1H1TP22492 207 aaPredicted RBP17.01■□□□□ 0.31
CAPN1-201ENST00000279247 KIAA1024LP59773 190 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 ESRRGP62508 458 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 PMS2P3Q13401 168 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 COL19A1Q14993 1142 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 GPR19Q15760 415 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 GPR153Q6NV75 609 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 GPR141Q7Z602 305 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 SLC22A18ASQ8N1D0 253 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 SLC38A5Q8WUX1 472 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 LZICQ8WZA0 190 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 TMEM19Q96HH6 336 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 CDC14AQ9UNH5 594 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 PRICKLE3O43900 615 aaPredicted RBP17.01■□□□□ 0.31
CAPN1-201ENST00000279247 HPRP00739 348 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 VIPP01282 170 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 FOSL2P15408 326 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 TYRP1P17643 537 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 DUSP2Q05923 314 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 TSEN54Q7Z6J9 526 aaKnown RBP17.01■□□□□ 0.31
CAPN1-201ENST00000279247 OR4N5Q8IXE1 308 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 OR5P2Q8WZ92 322 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 DDX31Q9H8H2 851 aaKnown RBP17.01■□□□□ 0.31
CAPN1-201ENST00000279247 ANGPT4Q9Y264 503 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 PCDHGA4Q9Y5G9 962 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 CEPT1Q9Y6K0 416 aa17.01■□□□□ 0.31
CAPN1-201ENST00000279247 A0A0A6YYD5 115 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 PRR19A6NJB7 356 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 FAM227AF5H4B4 570 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 TNFRSF11BO00300 401 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 IL1RNP18510 177 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 MAOBP27338 520 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 FADDQ13158 208 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 IFI44LQ53G44 452 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 ABHD17CQ6PCB6 329 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 TAF8Q7Z7C8 310 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 PIK3C3Q8NEB9 887 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 KCNC2Q96PR1 638 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 SIRT3Q9NTG7 399 aaPredicted RBP17■□□□□ 0.31
CAPN1-201ENST00000279247 RLIMQ9NVW2 624 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 TSC22D4Q9Y3Q8 395 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 HEBP2Q9Y5Z4 205 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 SLC28A2O43868 658 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 ZNF888P0CJ79 500 aaPredicted RBP17■□□□□ 0.31
CAPN1-201ENST00000279247 CDH2P19022 906 aaPredicted RBP17■□□□□ 0.31
CAPN1-201ENST00000279247 ATP5A1P25705 553 aaKnown RBP17■□□□□ 0.31
CAPN1-201ENST00000279247 HNRNPFP52597 415 aaKnown RBP17■□□□□ 0.31
CAPN1-201ENST00000279247 PPP1CAP62136 330 aa17■□□□□ 0.31
CAPN1-201ENST00000279247 LASP1Q14847 261 aaKnown RBP17■□□□□ 0.31
CAPN1-201ENST00000279247 MYBPC3Q14896 1274 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms