RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 GLYATQ6IB77 296 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 NIPAL1Q6NVV3 410 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 KMT5CQ86Y97 462 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 PDSS2Q86YH6 399 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 SPPL2CQ8IUH8 684 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 C10orf111Q8N326 155 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 OR52E4Q8NGH9 312 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 NAT6Q93015 286 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 SLC35A5Q9BS91 424 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 SOHLH2Q9NX45 425 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 GPR179Q6PRD1 2367 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 KMT2EQ8IZD2 1858 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 FITM1A5D6W6 292 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 TOX3O15405 576 aaPredicted RBP13.33□□□□□ -0.28
SS18-201ENST00000269137 GMNNO75496 209 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 KRT75O95678 551 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 C1QCP02747 245 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 CTSBP07858 339 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 SLC7A1P30825 629 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 NTSP30990 170 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 TLX1P31314 330 aaPredicted RBP13.33□□□□□ -0.28
SS18-201ENST00000269137 NUBP1P53384 320 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 EMP3P54852 163 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 HSD11B2P80365 405 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 FAM53BQ14153 422 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 MAP7Q14244 749 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 LPAL2Q16609 132 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 NDUFA9Q16795 377 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 INAVAQ3KP66 663 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 MTX3Q5HYI7 312 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 CPZQ66K79 652 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 GUSBP11Q6P575 273 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 ERICH5Q6P6B1 374 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 USP53Q70EK8 1073 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 EID2Q8N6I1 236 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 SLC41A2Q96JW4 573 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 C10orf90Q96M02 699 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 AMDHD1Q96NU7 426 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 RPF2Q9H7B2 306 aaKnown RBP13.33□□□□□ -0.28
SS18-201ENST00000269137 CXorf36Q9H7Y0 433 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 ANKHQ9HCJ1 492 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 STARD5Q9NSY2 213 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 KLHL3Q9UH77 587 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 NAALAD2Q9Y3Q0 740 aa13.33□□□□□ -0.28
SS18-201ENST00000269137 TCRBV5S2A0A599 114 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 CPED1A4D0V7 1026 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 GLOD5A6NK44 160 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 WASHC1A8K0Z3 465 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 GALR2O43603 387 aaPredicted RBP13.32□□□□□ -0.28
SS18-201ENST00000269137 PRKRAO75569 313 aaKnown RBP13.32□□□□□ -0.28
SS18-201ENST00000269137 KCNK5O95279 499 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 BAG2O95816 211 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 MSL3P1P0C860 447 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 UMPSP11172 480 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 NCK1P16333 377 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 CPN2P22792 545 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 MPLP40238 635 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 GTF2A1P52655 376 aaPredicted RBP13.32□□□□□ -0.28
SS18-201ENST00000269137 MVDP53602 400 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 POLE2P56282 527 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 SKP1P63208 163 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 VAC14Q08AM6 782 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 RGNQ15493 299 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 CYP51A1Q16850 503 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 OR52E8Q6IFG1 317 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 FAM180BQ6P0A1 224 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 RNF111Q6ZNA4 994 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 SAMD14Q8IZD0 417 aaPredicted RBP13.32□□□□□ -0.28
SS18-201ENST00000269137 D2HGDHQ8N465 521 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 OR52N2Q8NGI0 321 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 OR2I1PQ8NGU4 316 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 ZFP28Q8NHY6 868 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 CNRIP1Q96F85 164 aaPredicted RBP13.32□□□□□ -0.28
SS18-201ENST00000269137 NSMCE2Q96MF7 247 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 ZNF681Q96N22 645 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 BBS4Q96RK4 519 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 CHST8Q9H2A9 424 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 GLIPR2Q9H4G4 154 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 RAD21L1Q9H4I0 556 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 EPS8L2Q9H6S3 715 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 CLK4Q9HAZ1 481 aaKnown RBP13.32□□□□□ -0.28
SS18-201ENST00000269137 SIRT3Q9NTG7 399 aaPredicted RBP13.32□□□□□ -0.28
SS18-201ENST00000269137 CCM2LQ9NUG4 571 aaPredicted RBP13.32□□□□□ -0.28
SS18-201ENST00000269137 GIMAP4Q9NUV9 329 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 GPATCH2Q9NW75 528 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 GMEB2Q9UKD1 530 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 SPACA6W5XKT8 324 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 GSTA4O15217 222 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 DNAJB6O75190 326 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 GPIP06744 558 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 ZNF883P0CG24 379 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 CSNK2A2P19784 350 aaPredicted RBP13.32□□□□□ -0.28
SS18-201ENST00000269137 FADDQ13158 208 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 ADRM1Q16186 407 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 TMEM71Q6P5X7 295 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 PRSS41Q7RTY9 318 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 PTOV1Q86YD1 416 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 ZZZ3Q8IYH5 903 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 CLEC4FQ8N1N0 589 aa13.32□□□□□ -0.28
SS18-201ENST00000269137 POP5Q969H6 163 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms