RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 EHD1Q9H4M9 534 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 CLK4Q9HAZ1 481 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 A0A1W2PPC4 97 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 TFPIP10646 304 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 DDCP20711 480 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 HIST1H1TP22492 207 aaPredicted RBP13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 TCEA1P23193 301 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 MASP1P48740 699 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 RUNX1T1Q06455 604 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 DAG1Q14118 895 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 NNATQ16517 81 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 EIPR1Q53HC9 387 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 C16orf87Q6PH81 154 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 KLHDC8BQ8IXV7 354 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 MFSD2AQ8NA29 543 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 ATP6V1C2Q8NEY4 427 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 GAL3ST3Q96A11 431 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 MAELQ96JY0 434 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 SLC6A16Q9GZN6 736 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 OR51I1Q9H343 314 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 ACTL8Q9H568 366 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 SCHIP1Q9P0W5 487 aaPredicted RBP13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 A0A1B0GTW7 788 aa13.77□□□□□ -0.2
PDLIM2-201ENST00000265810 GRXCR2A6NFK2 248 aa13.77□□□□□ -0.2
PDLIM2-201ENST00000265810 FOXE1O00358 373 aaPredicted RBP13.77□□□□□ -0.2
PDLIM2-201ENST00000265810 RDH16O75452 317 aa13.77□□□□□ -0.2
PDLIM2-201ENST00000265810 HSD17B1P14061 328 aa13.77□□□□□ -0.2
PDLIM2-201ENST00000265810 PRKACGP22612 351 aa13.77□□□□□ -0.2
PDLIM2-201ENST00000265810 CCR5P51681 352 aa13.77□□□□□ -0.2
PDLIM2-201ENST00000265810 TAS2R38P59533 333 aa13.77□□□□□ -0.2
PDLIM2-201ENST00000265810 TARDBPQ13148 414 aaKnown RBP eCLIP13.77□□□□□ -0.2
PDLIM2-201ENST00000265810 GPR153Q6NV75 609 aa13.77□□□□□ -0.2
PDLIM2-201ENST00000265810 SLC29A4Q7RTT9 530 aa13.77□□□□□ -0.2
PDLIM2-201ENST00000265810 THAP5Q7Z6K1 395 aa13.77□□□□□ -0.2
PDLIM2-201ENST00000265810 RHBDD1Q8TEB9 315 aa13.77□□□□□ -0.2
PDLIM2-201ENST00000265810 Q96MT0 163 aa13.77□□□□□ -0.2
PDLIM2-201ENST00000265810 RARRES3Q9UL19 164 aa13.77□□□□□ -0.2
PDLIM2-201ENST00000265810 PLCL2Q9UPR0 1127 aa13.77□□□□□ -0.2
PDLIM2-201ENST00000265810 SGK494L7N484 410 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 MYL12BO14950 172 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 TMEM184AQ6ZMB5 413 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 MSANTD1Q6ZTZ1 278 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 RETREG3Q86VR2 466 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 SDR16C5Q8N3Y7 309 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 OR10G2Q8NGC3 310 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 MR1Q95460 341 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 TMEM125Q96AQ2 219 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 SERINC2Q96SA4 455 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 CFL2Q9Y281 166 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 RALGAPA2Q2PPJ7 1873 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 IGLV3-16A0A075B6K0 115 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 A0A1B0GTL3 188 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 HAT1O14929 419 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 ZBTB11O95625 1053 aaPredicted RBP13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 FBLP22087 321 aaKnown RBP13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 DNAJA1P31689 397 aaKnown RBP13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 BROXQ5VW32 411 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 GALNT12Q8IXK2 581 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 MOAP1Q96BY2 351 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 TRAPPC9Q96Q05 1148 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 CLMPQ9H6B4 373 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 KIR3DX1Q9H7L2 352 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 TMEM45AQ9NWC5 275 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 WDR37Q9Y2I8 494 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 CABIN1Q9Y6J0 2220 aa13.77□□□□□ -0.21
PDLIM2-201ENST00000265810 MYOFQ9NZM1 2061 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 H0YGG7 62 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 KLK8O60259 260 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 GSTM2P28161 218 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 GABRA3P34903 492 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 SLC6A12P48065 614 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 ARF3P61204 181 aaPredicted RBP13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 RBBP4Q09028 425 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 VN1R5Q7Z5H4 357 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 LGI4Q8N135 537 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 NAGSQ8N159 534 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 PIGXQ8TBF5 258 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 TBL1XR1Q9BZK7 514 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 MYNNQ9NPC7 610 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 TMEM265A0A087WTH1 108 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 ARNTLO00327 626 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 KPNA4O00629 521 aaPredicted RBP13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 FBP2O00757 339 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 GAPDHSO14556 408 aaPredicted RBP13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 AHRP35869 848 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 KLHL12Q53G59 568 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 METTL4Q8N3J2 472 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 RHCGQ9UBD6 479 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 WNT16Q9UBV4 365 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 TOR1BO14657 336 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 HEXBP07686 556 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 KIR2DL1P43626 348 aaPredicted RBP13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 NRG3P56975 720 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 CSNK1G2P78368 415 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 EID2Q8N6I1 236 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 GTF2H4Q92759 462 aa13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 UTP4Q969X6 686 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-201ENST00000265810 GABRG3Q99928 467 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms