RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 CMTM6Q9NX76 183 aa21.42■■□□□ 1.02
UFD1-201ENST00000263202 SIDT1Q9NXL6 827 aaKnown RBP21.42■■□□□ 1.02
UFD1-201ENST00000263202 SLC7A8Q9UHI5 535 aa21.42■■□□□ 1.02
UFD1-201ENST00000263202 WDR87Q6ZQQ6 2873 aa21.42■■□□□ 1.02
UFD1-201ENST00000263202 A0A1W2PRB8 838 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 NME4O00746 187 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 ANP32DO95626 131 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 RUNDC3AQ59EK9 446 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 RABL3Q5HYI8 236 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 HPS6Q86YV9 775 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 FAM13CQ8NE31 585 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 GBP5Q96PP8 586 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 SLC35C2Q9NQQ7 365 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 C15orf38-AP3S2A0A0A6YYH1 394 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 AGRPO00253 132 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 CHST10O43529 356 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 C6orf47O95873 294 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 TLX1P31314 330 aaPredicted RBP21.41■■□□□ 1.02
UFD1-201ENST00000263202 PDX1P52945 283 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 RAB38P57729 211 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 HBA1P69905 142 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 PRAMEF17Q5VTA0 474 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 ARPINQ7Z6K5 226 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 RNF148Q8N7C7 305 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 OR4A15Q8NGL6 344 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 GOT1L1Q8NHS2 421 aaPredicted RBP21.41■■□□□ 1.02
UFD1-201ENST00000263202 OR6C1Q96RD1 312 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 RPF2Q9H7B2 306 aaKnown RBP21.41■■□□□ 1.02
UFD1-201ENST00000263202 PRDM9Q9NQV7 894 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.41■■□□□ 1.02
UFD1-201ENST00000263202 SPACA6W5XKT8 324 aa21.41■■□□□ 1.02
UFD1-201ENST00000263202 CYR61O00622 381 aa21.4■■□□□ 1.02
UFD1-201ENST00000263202 ZNF749O43361 778 aa21.4■■□□□ 1.02
UFD1-201ENST00000263202 AVPR1BP47901 424 aa21.4■■□□□ 1.02
UFD1-201ENST00000263202 SHC2P98077 582 aa21.4■■□□□ 1.02
UFD1-201ENST00000263202 SELPLGQ14242 412 aa21.4■■□□□ 1.02
UFD1-201ENST00000263202 ZNF621Q6ZSS3 439 aa21.4■■□□□ 1.02
UFD1-201ENST00000263202 TTLL10Q6ZVT0 673 aa21.4■■□□□ 1.02
UFD1-201ENST00000263202 OR8J3Q8NGG0 315 aa21.4■■□□□ 1.02
UFD1-201ENST00000263202 MMABQ96EY8 250 aaPredicted RBP21.4■■□□□ 1.02
UFD1-201ENST00000263202 PHF12Q96QT6 1004 aa21.4■■□□□ 1.02
UFD1-201ENST00000263202 NDC1Q9BTX1 674 aa21.4■■□□□ 1.02
UFD1-201ENST00000263202 CD300AQ9UGN4 299 aa21.4■■□□□ 1.02
UFD1-201ENST00000263202 TMEM184BQ9Y519 407 aaPredicted RBP21.4■■□□□ 1.02
UFD1-201ENST00000263202 SPEGQ15772 3267 aa21.4■■□□□ 1.02
UFD1-201ENST00000263202 PRORSD1PA6NEY8 169 aa21.39■■□□□ 1.02
UFD1-201ENST00000263202 H0YIG0 161 aa21.39■■□□□ 1.02
UFD1-201ENST00000263202 HYAL3O43820 417 aaPredicted RBP21.39■■□□□ 1.02
UFD1-201ENST00000263202 FOXD2O60548 495 aaPredicted RBP21.39■■□□□ 1.02
UFD1-201ENST00000263202 ERAL1O75616 437 aaKnown RBP21.39■■□□□ 1.02
UFD1-201ENST00000263202 ZCCHC18P0CG32 403 aa21.39■■□□□ 1.02
UFD1-201ENST00000263202 MTPNP58546 118 aa21.39■■□□□ 1.02
UFD1-201ENST00000263202 C16orf72Q14CZ0 275 aa21.39■■□□□ 1.02
UFD1-201ENST00000263202 SAMD4BQ5PRF9 694 aaKnown RBP21.39■■□□□ 1.02
UFD1-201ENST00000263202 OR52E8Q6IFG1 317 aa21.39■■□□□ 1.02
UFD1-201ENST00000263202 METTL27Q8N6F8 245 aaPredicted RBP21.39■■□□□ 1.02
UFD1-201ENST00000263202 CNRIP1Q96F85 164 aaPredicted RBP21.39■■□□□ 1.02
UFD1-201ENST00000263202 CLK4Q9HAZ1 481 aaKnown RBP21.39■■□□□ 1.02
UFD1-201ENST00000263202 ACSS1Q9NUB1 689 aaPredicted RBP21.39■■□□□ 1.02
UFD1-201ENST00000263202 HCN3Q9P1Z3 774 aa21.39■■□□□ 1.02
UFD1-201ENST00000263202 PCDHGB4Q9UN71 923 aa21.39■■□□□ 1.02
UFD1-201ENST00000263202 L3MBTL1Q9Y468 752 aa21.39■■□□□ 1.02
UFD1-201ENST00000263202 ABCB1P08183 1280 aaPredicted RBP21.39■■□□□ 1.01
UFD1-201ENST00000263202 ARSFP54793 590 aa21.39■■□□□ 1.01
UFD1-201ENST00000263202 SIM1P81133 766 aaPredicted RBP21.39■■□□□ 1.01
UFD1-201ENST00000263202 ILKQ13418 452 aa21.39■■□□□ 1.01
UFD1-201ENST00000263202 STPG1Q5TH74 334 aa21.39■■□□□ 1.01
UFD1-201ENST00000263202 YOD1Q5VVQ6 348 aaPredicted RBP21.39■■□□□ 1.01
UFD1-201ENST00000263202 PIP4P1Q86T03 277 aa21.39■■□□□ 1.01
UFD1-201ENST00000263202 TMEM52Q8NDY8 209 aa21.39■■□□□ 1.01
UFD1-201ENST00000263202 OR5P2Q8WZ92 322 aa21.39■■□□□ 1.01
UFD1-201ENST00000263202 MVB12AQ96EY5 273 aa21.39■■□□□ 1.01
UFD1-201ENST00000263202 ZBED6CLQ96FA7 236 aaPredicted RBP21.39■■□□□ 1.01
UFD1-201ENST00000263202 AURKBQ96GD4 344 aaPredicted RBP21.39■■□□□ 1.01
UFD1-201ENST00000263202 CPPED1Q9BRF8 314 aaPredicted RBP21.39■■□□□ 1.01
UFD1-201ENST00000263202 IKZF5Q9H5V7 419 aa21.39■■□□□ 1.01
UFD1-201ENST00000263202 OCIAD1Q9NX40 245 aa21.39■■□□□ 1.01
UFD1-201ENST00000263202 TAS2R9Q9NYW1 312 aa21.39■■□□□ 1.01
UFD1-201ENST00000263202 DHCR7Q9UBM7 475 aaKnown RBP21.39■■□□□ 1.01
UFD1-201ENST00000263202 PSME2Q9UL46 239 aa21.39■■□□□ 1.01
UFD1-201ENST00000263202 CLCA2Q9UQC9 943 aa21.39■■□□□ 1.01
UFD1-201ENST00000263202 MYO1GB0I1T2 1018 aa21.38■■□□□ 1.01
UFD1-201ENST00000263202 FAM227AF5H4B4 570 aa21.38■■□□□ 1.01
UFD1-201ENST00000263202 H0YHG0 523 aa21.38■■□□□ 1.01
UFD1-201ENST00000263202 ME2P23368 584 aa21.38■■□□□ 1.01
UFD1-201ENST00000263202 CSTF2P33240 577 aaKnown RBP eCLIP21.38■■□□□ 1.01
UFD1-201ENST00000263202 MANFP55145 182 aaKnown RBP21.38■■□□□ 1.01
UFD1-201ENST00000263202 MLC1Q15049 377 aa21.38■■□□□ 1.01
UFD1-201ENST00000263202 RBM44Q6ZP01 1051 aaKnown RBP21.38■■□□□ 1.01
UFD1-201ENST00000263202 ZNF681Q96N22 645 aa21.38■■□□□ 1.01
UFD1-201ENST00000263202 TRIM4Q9C037 500 aa21.38■■□□□ 1.01
UFD1-201ENST00000263202 VPS4AQ9UN37 437 aa21.38■■□□□ 1.01
UFD1-201ENST00000263202 A0A1W2PS29 197 aa21.37■■□□□ 1.01
UFD1-201ENST00000263202 A8MUI8 341 aa21.37■■□□□ 1.01
UFD1-201ENST00000263202 DSCR3O14972 297 aa21.37■■□□□ 1.01
UFD1-201ENST00000263202 NVLO15381 856 aaKnown RBP21.37■■□□□ 1.01
UFD1-201ENST00000263202 RFPL3O75679 317 aa21.37■■□□□ 1.01
UFD1-201ENST00000263202 RNH1P13489 461 aaKnown RBP21.37■■□□□ 1.01
UFD1-201ENST00000263202 ALAS2P22557 587 aa21.37■■□□□ 1.01
UFD1-201ENST00000263202 NTSP30990 170 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms