RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 PCSK5Q92824 1860 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 FAM208BQ5VWN6 2430 aa17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 A6NL46 340 aa17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 DYRK3O43781 588 aa17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 TMPRSS11DO60235 418 aa17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 PCDH7O60245 1069 aa17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 IFNA16P05015 189 aa17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 COX7A2P14406 83 aa17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 TPP2P29144 1249 aaPredicted RBP17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 HNRNPH2P55795 449 aaKnown RBP17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 MYBPC3Q14896 1274 aa17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 PCOLCEQ15113 449 aa17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 HSP90B2PQ58FF3 399 aa17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 OR52E8Q6IFG1 317 aa17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 JMJD6Q6NYC1 403 aaPredicted RBP17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 PAPD4Q6PIY7 484 aaKnown RBP17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 HPS6Q86YV9 775 aa17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 PARP9Q8IXQ6 854 aa17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 FAM76AQ8TAV0 307 aa17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 TWIST2Q8WVJ9 160 aa17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 PELOQ9BRX2 385 aaKnown RBP17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 ALOXE3Q9BYJ1 711 aa17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 TRIM55Q9BYV6 548 aa17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 NECTIN3Q9NQS3 549 aa17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 SIRT5Q9NXA8 310 aa17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 DNAJC15Q9Y5T4 150 aa17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 CACNA1GO43497 2377 aa17.59■□□□□ 0.41
CYSTM1-201ENST00000261811 IGKV3D-11A0A0A0MRZ8 115 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 C1orf226A1L170 272 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 SEC22BO75396 215 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 DNAJB5O75953 348 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 SEC24DO94855 1032 aaPredicted RBP17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 SERPINA7P05543 415 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 CHN1P15882 459 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 PRPH2P23942 346 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 TIA1P31483 386 aaKnown RBP eCLIP17.58■□□□□ 0.42e-6■■■■□ 21.2
CYSTM1-201ENST00000261811 PGDP52209 483 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 WDR4P57081 412 aaKnown RBP17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 NR6A1Q15406 480 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 TERF2Q15554 542 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 BTBD16Q32M84 506 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 TTMPQ5BVD1 217 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 PLAG1Q6DJT9 500 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 TCTN3Q6NUS6 607 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 CLNKQ7Z7G1 428 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 TMEM132CQ8N3T6 1108 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 M1APQ8TC57 530 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 DYDC1Q8WWB3 177 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 TM9SF4Q92544 642 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 ABHD17AQ96GS6 310 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 RBM18Q96H35 190 aaKnown RBP17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 THOC3Q96J01 351 aaKnown RBP17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 MANSC1Q9H8J5 431 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 TNFRSF12AQ9NP84 129 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 ADAP2Q9NPF8 381 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 PNO1Q9NRX1 252 aaKnown RBP17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 THAP1Q9NVV9 213 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 C1orf109Q9NX04 203 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 WBP11Q9Y2W2 641 aaKnown RBP17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 ZNF451Q9Y4E5 1061 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 CLCA3PQ9Y6N3 262 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 PIEZO2Q9H5I5 2752 aa17.58■□□□□ 0.4
CYSTM1-201ENST00000261811 A0A1W2PR48 441 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 LDB3O75112 727 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 CEACAM4O75871 244 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 ANXA4P09525 319 aaPredicted RBP17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 LINC00032P0C843 101 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 TNNI3P19429 210 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 PIK3R1P27986 724 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 RPL14P50914 215 aaKnown RBP17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 HNRNPFP52597 415 aaKnown RBP17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 PPP2R2AP63151 447 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 HEPACAMQ14CZ8 416 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 ELAVL1Q15717 326 aaKnown RBP17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 NDUFAF5Q5TEU4 345 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 AGAP7PQ5VUJ5 663 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 C18orf63Q68DL7 685 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 GALNT18Q6P9A2 607 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 SHISA5Q8N114 240 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 TMEM52Q8NDY8 209 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 DAZLQ92904 295 aaKnown RBP17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 APIPQ96GX9 242 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 IMMP1LQ96LU5 166 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 PPP3R2Q96LZ3 170 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 AGAP4Q96P64 663 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 DGAT2Q96PD7 388 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 SLC25A18Q9H1K4 315 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 LRTM1Q9HBL6 345 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 C5AR2Q9P296 337 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 VTI1BQ9UEU0 232 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 TEKT2Q9UIF3 430 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 ZDHHC2Q9UIJ5 367 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 TMED5Q9Y3A6 229 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 CPAMD8Q8IZJ3 1885 aa17.57■□□□□ 0.4
CYSTM1-201ENST00000261811 IGSF10Q6WRI0 2623 aa17.56■□□□□ 0.4
CYSTM1-201ENST00000261811 IGHV3-20A0A0C4DH32 117 aa17.56■□□□□ 0.4
CYSTM1-201ENST00000261811 SAGE2PA6NJ88 616 aa17.56■□□□□ 0.4
CYSTM1-201ENST00000261811 NPIPB8E9PQR5 432 aa17.56■□□□□ 0.4
CYSTM1-201ENST00000261811 ATP8B1O43520 1251 aa17.56■□□□□ 0.4
CYSTM1-201ENST00000261811 LYPLA1O75608 230 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms