RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 INTS11Q5TA45 600 aaKnown RBP17.9■□□□□ 0.46
TRIM47-201ENST00000254816 PTOV1Q86YD1 416 aa17.9■□□□□ 0.46
TRIM47-201ENST00000254816 GOLM1Q8NBJ4 401 aa17.9■□□□□ 0.46
TRIM47-201ENST00000254816 TFAP2CQ92754 450 aa17.9■□□□□ 0.46
TRIM47-201ENST00000254816 RNF145Q96MT1 663 aa17.9■□□□□ 0.46
TRIM47-201ENST00000254816 PRMT8Q9NR22 394 aaPredicted RBP17.9■□□□□ 0.46
TRIM47-201ENST00000254816 STARD5Q9NSY2 213 aa17.9■□□□□ 0.46
TRIM47-201ENST00000254816 RAPGEFL1Q9UHV5 662 aa17.9■□□□□ 0.46
TRIM47-201ENST00000254816 MRPS2Q9Y399 296 aaKnown RBP17.9■□□□□ 0.46
TRIM47-201ENST00000254816 KLK4Q9Y5K2 254 aa17.9■□□□□ 0.46
TRIM47-201ENST00000254816 TBX19O60806 448 aa17.89■□□□□ 0.46
TRIM47-201ENST00000254816 DNAJB6O75190 326 aa17.89■□□□□ 0.46
TRIM47-201ENST00000254816 AIFM1O95831 613 aa17.89■□□□□ 0.46
TRIM47-201ENST00000254816 PROS1P07225 676 aa17.89■□□□□ 0.46
TRIM47-201ENST00000254816 CTSBP07858 339 aa17.89■□□□□ 0.46
TRIM47-201ENST00000254816 IL1RNP18510 177 aa17.89■□□□□ 0.46
TRIM47-201ENST00000254816 HOXA6P31267 233 aa17.89■□□□□ 0.46
TRIM47-201ENST00000254816 PTGER1P34995 402 aa17.89■□□□□ 0.46
TRIM47-201ENST00000254816 MANFP55145 182 aaKnown RBP17.89■□□□□ 0.46
TRIM47-201ENST00000254816 BNC1Q01954 994 aa17.89■□□□□ 0.46
TRIM47-201ENST00000254816 ADRM1Q16186 407 aa17.89■□□□□ 0.46
TRIM47-201ENST00000254816 FAM92BQ6ZTR7 304 aa17.89■□□□□ 0.46
TRIM47-201ENST00000254816 RNF44Q7L0R7 432 aa17.89■□□□□ 0.46
TRIM47-201ENST00000254816 GALNT10Q86SR1 603 aa17.89■□□□□ 0.46
TRIM47-201ENST00000254816 C17orf82Q86X59 251 aaPredicted RBP17.89■□□□□ 0.46
TRIM47-201ENST00000254816 MAML2Q8IZL2 1156 aaPredicted RBP17.89■□□□□ 0.46
TRIM47-201ENST00000254816 ZCCHC7Q8N3Z6 543 aaKnown RBP17.89■□□□□ 0.46
TRIM47-201ENST00000254816 OR10Q1Q8NGQ4 319 aa17.89■□□□□ 0.46
TRIM47-201ENST00000254816 ZFAND2BQ8WV99 257 aa17.89■□□□□ 0.46
TRIM47-201ENST00000254816 EDAQ92838 391 aa17.89■□□□□ 0.46
TRIM47-201ENST00000254816 MAL2Q969L2 176 aa17.89■□□□□ 0.46
TRIM47-201ENST00000254816 RERGQ96A58 199 aaPredicted RBP17.89■□□□□ 0.46
TRIM47-201ENST00000254816 UTS2RQ9UKP6 389 aa17.89■□□□□ 0.46
TRIM47-201ENST00000254816 COMMD3-BMI1R4GMX3 469 aa17.89■□□□□ 0.46
TRIM47-201ENST00000254816 DMDP11532 3685 aa17.89■□□□□ 0.46
TRIM47-201ENST00000254816 VPS13AQ96RL7 3174 aa17.89■□□□□ 0.45
TRIM47-201ENST00000254816 CCDC163A0A0D9SF12 145 aa17.89■□□□□ 0.45
TRIM47-201ENST00000254816 ACOX3O15254 700 aa17.89■□□□□ 0.45
TRIM47-201ENST00000254816 SCELO95171 688 aa17.89■□□□□ 0.45
TRIM47-201ENST00000254816 H6PDO95479 791 aa17.89■□□□□ 0.45
TRIM47-201ENST00000254816 UMPSP11172 480 aa17.89■□□□□ 0.45
TRIM47-201ENST00000254816 MYF5P13349 255 aa17.89■□□□□ 0.45
TRIM47-201ENST00000254816 CRATP43155 626 aa17.89■□□□□ 0.45
TRIM47-201ENST00000254816 GSTM5P46439 218 aa17.89■□□□□ 0.45
TRIM47-201ENST00000254816 MVDP53602 400 aa17.89■□□□□ 0.45
TRIM47-201ENST00000254816 PCBP4P57723 403 aaKnown RBP17.89■□□□□ 0.45
TRIM47-201ENST00000254816 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.89■□□□□ 0.45
TRIM47-201ENST00000254816 DEFB134Q4QY38 66 aa17.89■□□□□ 0.45
TRIM47-201ENST00000254816 WDR5BQ86VZ2 330 aa17.89■□□□□ 0.45
TRIM47-201ENST00000254816 SLC25A45Q8N413 288 aa17.89■□□□□ 0.45
TRIM47-201ENST00000254816 ZFP28Q8NHY6 868 aa17.89■□□□□ 0.45
TRIM47-201ENST00000254816 DGCR14Q96DF8 476 aaKnown RBP17.89■□□□□ 0.45
TRIM47-201ENST00000254816 C9orf16Q9BUW7 83 aa17.89■□□□□ 0.45
TRIM47-201ENST00000254816 RBM38Q9H0Z9 239 aaKnown RBP17.89■□□□□ 0.45
TRIM47-201ENST00000254816 CHST8Q9H2A9 424 aa17.89■□□□□ 0.45
TRIM47-201ENST00000254816 SEMA6CQ9H3T2 930 aa17.89■□□□□ 0.45
TRIM47-201ENST00000254816 FSCN3Q9NQT6 498 aa17.89■□□□□ 0.45
TRIM47-201ENST00000254816 PNPLA3Q9NST1 481 aa17.89■□□□□ 0.45
TRIM47-201ENST00000254816 NDUFA13Q9P0J0 144 aa17.89■□□□□ 0.45
TRIM47-201ENST00000254816 SLC9B1P1A6NJY1 282 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 H3BNH8 94 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 EI24O14681 340 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 CLIC3O95833 236 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 SERPINA1P01009 418 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 ETFAP13804 333 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 CHI3L1P36222 383 aaPredicted RBP17.88■□□□□ 0.45
TRIM47-201ENST00000254816 CAPZBP47756 277 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 CDH15P55291 814 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 VSX2P58304 361 aaPredicted RBP17.88■□□□□ 0.45
TRIM47-201ENST00000254816 TGM3Q08188 693 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 TEAD4Q15561 434 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 VMACQ2NL98 169 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 ZNF750Q32MQ0 723 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 C14orf28Q4W4Y0 310 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 NKAIN2Q5VXU1 208 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 CPZQ66K79 652 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 PMS2CLQ68D20 193 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 OGFOD3Q6PK18 319 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 PRSS41Q7RTY9 318 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 SHISA5Q8N114 240 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 TRIML2Q8N7C3 387 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 CAMKVQ8NCB2 501 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 RMND5BQ96G75 393 aaPredicted RBP17.88■□□□□ 0.45
TRIM47-201ENST00000254816 MAP3K3Q99759 626 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 ADI1Q9BV57 179 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 FAIM2Q9BWQ8 316 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 MYRFQ9Y2G1 1151 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 MAP4K5Q9Y4K4 846 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 CABIN1Q9Y6J0 2220 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 A0A1W2PS29 197 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 ERAL1O75616 437 aaKnown RBP17.88■□□□□ 0.45
TRIM47-201ENST00000254816 SMIM10L1P0DMW3 83 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 DRD2P14416 443 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 CTSKP43235 329 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 CDK9P50750 372 aaKnown RBP17.88■□□□□ 0.45
TRIM47-201ENST00000254816 ARFIP1P53367 373 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 OLR1P78380 273 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 NKG7Q16617 165 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 RNF130Q86XS8 419 aa17.88■□□□□ 0.45
TRIM47-201ENST00000254816 PACRGLQ8N7B6 248 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms