RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 HKDC1Q2TB90 917 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 TOR1AIP1Q5JTV8 583 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 HENMT1Q5T8I9 393 aaKnown RBP16.2■□□□□ 0.18
FOXA1-201ENST00000250448 ACSM2BQ68CK6 577 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 VRK3Q8IV63 474 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 CYP4Z2PQ8N1L4 340 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 NIPSNAP1Q9BPW8 284 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 IMPAD1Q9NX62 359 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 TAS2R16Q9NYV7 291 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 OR56A5P0C7T3 313 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 PTX3P26022 381 aaPredicted RBP16.2■□□□□ 0.18
FOXA1-201ENST00000250448 CDH12P55289 794 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 SELENOWP63302 87 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 IRF8Q02556 426 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 TEAD4Q15561 434 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 EXOC3L2Q2M3D2 409 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 OR52J3Q8NH60 311 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 C9orf43Q8TAL5 461 aaPredicted RBP16.2■□□□□ 0.18
FOXA1-201ENST00000250448 SDHCQ99643 169 aaPredicted RBP16.2■□□□□ 0.18
FOXA1-201ENST00000250448 NPAP1Q9NZP6 1156 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 CFL2Q9Y281 166 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 DNAH14Q0VDD8 3507 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 PRR23AA6NEV1 266 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 MPC1LP0DKB6 136 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 C6P13671 934 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 CD22P20273 847 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 CYP2A7P20853 494 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 SP140Q13342 867 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 CPTPQ5TA50 214 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 ERN2Q76MJ5 926 aaKnown RBP16.2■□□□□ 0.18
FOXA1-201ENST00000250448 MTERF1Q99551 399 aaKnown RBP16.2■□□□□ 0.18
FOXA1-201ENST00000250448 ROGDIQ9GZN7 287 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 CD207Q9UJ71 328 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 ZNF221Q9UK13 617 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 NOX1Q9Y5S8 564 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 TMEM202A6NGA9 273 aa16.19■□□□□ 0.18
FOXA1-201ENST00000250448 SOX1O00570 391 aaPredicted RBP16.19■□□□□ 0.18
FOXA1-201ENST00000250448 IDH3BO43837 385 aa16.19■□□□□ 0.18
FOXA1-201ENST00000250448 PTPN5P54829 565 aa16.19■□□□□ 0.18
FOXA1-201ENST00000250448 TSTQ16762 297 aaKnown RBP16.19■□□□□ 0.18
FOXA1-201ENST00000250448 ZNF284Q2VY69 593 aa16.19■□□□□ 0.18
FOXA1-201ENST00000250448 IFI44LQ53G44 452 aa16.19■□□□□ 0.18
FOXA1-201ENST00000250448 MTSS1LQ765P7 747 aa16.19■□□□□ 0.18
FOXA1-201ENST00000250448 NAGSQ8N159 534 aa16.19■□□□□ 0.18
FOXA1-201ENST00000250448 B3GNT7Q8NFL0 401 aa16.19■□□□□ 0.18
FOXA1-201ENST00000250448 WDR20Q8TBZ3 569 aa16.19■□□□□ 0.18
FOXA1-201ENST00000250448 CCDC32Q9BV29 185 aa16.19■□□□□ 0.18
FOXA1-201ENST00000250448 SPATA6Q9NWH7 488 aaPredicted RBP16.19■□□□□ 0.18
FOXA1-201ENST00000250448 MS4A12Q9NXJ0 267 aa16.19■□□□□ 0.18
FOXA1-201ENST00000250448 CFAP20Q9Y6A4 193 aaKnown RBP16.19■□□□□ 0.18
FOXA1-201ENST00000250448 PCDH7O60245 1069 aa16.19■□□□□ 0.18
FOXA1-201ENST00000250448 LZTS3O60299 673 aaPredicted RBP16.19■□□□□ 0.18
FOXA1-201ENST00000250448 ABCB1P08183 1280 aaPredicted RBP16.19■□□□□ 0.18
FOXA1-201ENST00000250448 ATP1B2P14415 290 aaPredicted RBP16.19■□□□□ 0.18
FOXA1-201ENST00000250448 OR2B6P58173 313 aa16.19■□□□□ 0.18
FOXA1-201ENST00000250448 PFN3P60673 137 aa16.19■□□□□ 0.18
FOXA1-201ENST00000250448 ZNF33BQ06732 778 aa16.19■□□□□ 0.18
FOXA1-201ENST00000250448 MICAQ29983 383 aa16.19■□□□□ 0.18
FOXA1-201ENST00000250448 TIMM50Q3ZCQ8 353 aa16.19■□□□□ 0.18
FOXA1-201ENST00000250448 LIPJQ5W064 366 aa16.19■□□□□ 0.18
FOXA1-201ENST00000250448 ZNF544Q6NX49 715 aa16.19■□□□□ 0.18
FOXA1-201ENST00000250448 LILRA3Q8N6C8 439 aaPredicted RBP16.19■□□□□ 0.18
FOXA1-201ENST00000250448 ELMO1Q92556 727 aa16.19■□□□□ 0.18
FOXA1-201ENST00000250448 CEP19Q96LK0 163 aa16.19■□□□□ 0.18
FOXA1-201ENST00000250448 OR5M11Q96RB7 305 aa16.19■□□□□ 0.18
FOXA1-201ENST00000250448 COLQQ9Y215 455 aaPredicted RBP16.19■□□□□ 0.18
FOXA1-201ENST00000250448 GABRR3A8MPY1 467 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 EGFP01133 1207 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 CD72P21854 359 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 CTHP32929 405 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 DRD3P35462 400 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 SLC15A1P46059 708 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 CTSCP53634 463 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 XKR6Q5GH73 641 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 VPS37AQ8NEZ2 397 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 TP53INP1Q96A56 240 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 KCNS3Q9BQ31 491 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 OR2B2Q9GZK3 357 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 C14orf119Q9NWQ9 140 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 WBP11Q9Y2W2 641 aaKnown RBP16.18■□□□□ 0.18
FOXA1-201ENST00000250448 PLXNA2O75051 1894 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 TRPM6Q9BX84 2022 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 IGLV3-16A0A075B6K0 115 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 PDZK1P1A8MUH7 402 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 SLC16A5O15375 505 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 PBLDP30039 288 aaPredicted RBP16.18■□□□□ 0.18
FOXA1-201ENST00000250448 KIR2DL1P43626 348 aaPredicted RBP16.18■□□□□ 0.18
FOXA1-201ENST00000250448 OR1E2P47887 323 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 AP1S2P56377 157 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 ANXA8L1Q5VT79 327 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 C19orf48Q6RUI8 117 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 OR9Q2Q8NGE9 314 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 CHTF18Q8WVB6 975 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 KLK6Q92876 244 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 DTD2Q96FN9 168 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 PPP1R16AQ96I34 528 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 COQ10AQ96MF6 247 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 SLC30A2Q9BRI3 323 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 SNX8Q9Y5X2 465 aa16.18■□□□□ 0.18
FOXA1-201ENST00000250448 A0A1W2PP55 124 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms