RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 RPF2Q9H7B2 306 aaKnown RBP19.7■□□□□ 0.74
HCFC1R1-201ENST00000248089 ZBTB26Q9HCK0 441 aa19.7■□□□□ 0.74
HCFC1R1-201ENST00000248089 SEC14L3Q9UDX4 400 aa19.7■□□□□ 0.74
HCFC1R1-201ENST00000248089 VTI1BQ9UEU0 232 aa19.7■□□□□ 0.74
HCFC1R1-201ENST00000248089 TBK1Q9UHD2 729 aa19.7■□□□□ 0.74
HCFC1R1-201ENST00000248089 DOPEY1Q5JWR5 2465 aa19.7■□□□□ 0.74
HCFC1R1-201ENST00000248089 CYSRT1A8MQ03 144 aa19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 GOLGA8RI6L899 631 aa19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 LRRTM2O43300 516 aa19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 FGF17O60258 216 aa19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 PRKNO60260 465 aaPredicted RBP19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 EEDO75530 441 aaKnown RBP19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 ITGA10O75578 1167 aa19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 LDLRP01130 860 aa19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 SP1P08047 785 aa19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 SBK3P0C264 359 aa19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 TSPAN8P19075 237 aa19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 HLCSP50747 726 aa19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 CUL3Q13618 768 aa19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 SGO1Q5FBB7 561 aa19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 C18orf63Q68DL7 685 aa19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 SLC25A25Q6KCM7 469 aa19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 TIFABQ6ZNK6 161 aa19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 TMEM156Q8N614 296 aa19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 FAM98AQ8NCA5 519 aaKnown RBP19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 OR4F6Q8NGB9 312 aa19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 PTPMT1Q8WUK0 201 aaPredicted RBP19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 TMEM125Q96AQ2 219 aa19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 ANKRD9Q96BM1 317 aaPredicted RBP19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 NTMT1Q9BV86 223 aa19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 ZNF717Q9BY31 904 aaPredicted RBP19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 TSPAN10Q9H1Z9 355 aaPredicted RBP19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 EPB41L4BQ9H329 900 aa19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 LIN28AQ9H9Z2 209 aaKnown RBP19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 MS4A12Q9NXJ0 267 aa19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 PPIEQ9UNP9 301 aaKnown RBP19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 ATG4BQ9Y4P1 393 aa19.69■□□□□ 0.74
HCFC1R1-201ENST00000248089 FOXE1O00358 373 aaPredicted RBP19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 ZFAND5O76080 213 aa19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 TAC1P20366 129 aa19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 TLX1P31314 330 aaPredicted RBP19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 TRHRP34981 398 aaPredicted RBP19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 BSGP35613 385 aa19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 BUD31P41223 144 aaPredicted RBP19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 GPR143P51810 404 aa19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 IFT88Q13099 833 aa19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 C4orf17Q53FE4 359 aa19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 C1QL3Q5VWW1 255 aa19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 FRG2Q64ET8 278 aa19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 C16orf47Q6ZP98 133 aaPredicted RBP19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 MILR1Q7Z6M3 343 aa19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 NUDT13Q86X67 352 aa19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 ZNF321PQ8N8H1 164 aa19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 MORN4Q8NDC4 146 aa19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 SLC2A12Q8TD20 617 aa19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 ZNF483Q8TF39 744 aaPredicted RBP19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 DGAT2Q96PD7 388 aa19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 FRG2BQ96QU4 278 aa19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 SERPINI1Q99574 410 aa19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 ELOVL6Q9H5J4 265 aa19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 LYARQ9NX58 379 aaKnown RBP19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 TMEM216Q9P0N5 145 aa19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 PLEKHB1Q9UF11 243 aaPredicted RBP19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 CROCCQ5TZA2 2017 aa19.68■□□□□ 0.74
HCFC1R1-201ENST00000248089 A0A0A6YYD5 115 aa19.67■□□□□ 0.74
HCFC1R1-201ENST00000248089 TMPRSS11DO60235 418 aa19.67■□□□□ 0.74
HCFC1R1-201ENST00000248089 NME2P1O60361 137 aa19.67■□□□□ 0.74
HCFC1R1-201ENST00000248089 OTCP00480 354 aa19.67■□□□□ 0.74
HCFC1R1-201ENST00000248089 GBAP04062 536 aa19.67■□□□□ 0.74
HCFC1R1-201ENST00000248089 NR2F6P10588 404 aa19.67■□□□□ 0.74
HCFC1R1-201ENST00000248089 COX7A2P14406 83 aa19.67■□□□□ 0.74
HCFC1R1-201ENST00000248089 NME2P22392 152 aa19.67■□□□□ 0.74
HCFC1R1-201ENST00000248089 ARFIP1P53367 373 aa19.67■□□□□ 0.74
HCFC1R1-201ENST00000248089 CDH13P55290 713 aa19.67■□□□□ 0.74
HCFC1R1-201ENST00000248089 ALDH6A1Q02252 535 aaKnown RBP19.67■□□□□ 0.74
HCFC1R1-201ENST00000248089 FOLH1Q04609 750 aa19.67■□□□□ 0.74
HCFC1R1-201ENST00000248089 HSDL2Q6YN16 418 aa19.67■□□□□ 0.74
HCFC1R1-201ENST00000248089 FJX1Q86VR8 437 aa19.67■□□□□ 0.74
HCFC1R1-201ENST00000248089 ZNF227Q86WZ6 799 aa19.67■□□□□ 0.74
HCFC1R1-201ENST00000248089 CYP4Z2PQ8N1L4 340 aa19.67■□□□□ 0.74
HCFC1R1-201ENST00000248089 ARMC10Q8N2F6 343 aa19.67■□□□□ 0.74
HCFC1R1-201ENST00000248089 TMEM151AQ8N4L1 468 aa19.67■□□□□ 0.74
HCFC1R1-201ENST00000248089 UBLCP1Q8WVY7 318 aaPredicted RBP19.67■□□□□ 0.74
HCFC1R1-201ENST00000248089 FRMD6Q96NE9 622 aa19.67■□□□□ 0.74
HCFC1R1-201ENST00000248089 DDX31Q9H8H2 851 aaKnown RBP19.67■□□□□ 0.74
HCFC1R1-201ENST00000248089 COPS7AQ9UBW8 275 aa19.67■□□□□ 0.74
HCFC1R1-201ENST00000248089 A0A1B0GTL3 188 aa19.66■□□□□ 0.74
HCFC1R1-201ENST00000248089 GLOD5A6NK44 160 aa19.66■□□□□ 0.74
HCFC1R1-201ENST00000248089 CDK2AP1O14519 115 aa19.66■□□□□ 0.74
HCFC1R1-201ENST00000248089 OR2J2O76002 312 aa19.66■□□□□ 0.74
HCFC1R1-201ENST00000248089 FAM58BPP0C7Q3 252 aa19.66■□□□□ 0.74
HCFC1R1-201ENST00000248089 PYGBP11216 843 aa19.66■□□□□ 0.74
HCFC1R1-201ENST00000248089 SSR4P51571 173 aa19.66■□□□□ 0.74
HCFC1R1-201ENST00000248089 PLIN5Q00G26 463 aa19.66■□□□□ 0.74
HCFC1R1-201ENST00000248089 GGTA1PQ4G0N0 100 aa19.66■□□□□ 0.74
HCFC1R1-201ENST00000248089 HIST2H2BCQ6DN03 193 aa19.66■□□□□ 0.74
HCFC1R1-201ENST00000248089 LETMD1Q6P1Q0 360 aa19.66■□□□□ 0.74
HCFC1R1-201ENST00000248089 CPSF7Q8N684 471 aaKnown RBP19.66■□□□□ 0.74
HCFC1R1-201ENST00000248089 TANKQ92844 425 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms