RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 MYBPC3Q14896 1274 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 NR0B2Q15466 257 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 LCTLQ6UWM7 567 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 SLCO4C1Q6ZQN7 724 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 FAM92BQ6ZTR7 304 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 RBM12BQ8IXT5 1001 aaKnown RBP16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 C8orf59Q8N0T1 100 aaPredicted RBP16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 ZCCHC7Q8N3Z6 543 aaKnown RBP16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 OR2L3Q8NG85 312 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 PNPT1Q8TCS8 783 aaKnown RBP16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 RHBDD1Q8TEB9 315 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 SGCDQ92629 289 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 RBM4BQ9BQ04 359 aaKnown RBP16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 DCUN1D5Q9BTE7 237 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 RBM4Q9BWF3 364 aaKnown RBP16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 REXO4Q9GZR2 422 aaKnown RBP16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 SYNDIG1Q9H7V2 258 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 MRPS30Q9NP92 439 aaKnown RBP16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 ERVK-11Q9UQG0 969 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 PTPRZ1P23471 2315 aaPredicted RBP16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 C4orf47A7E2U8 309 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 H3BMQ9 156 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 SH3BGRLO75368 114 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 PROS1P07225 676 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 ACPPP15309 386 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 IL1RNP18510 177 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 TTKP33981 857 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 GFERP55789 205 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 DAB2P98082 770 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 PRDX1Q06830 199 aaKnown RBP16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 KCNAB2Q13303 367 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 SPIDRQ14159 915 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 UGT8Q16880 541 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 LIPJQ5W064 366 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 OOSP2Q86WS3 158 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 KLHDC8AQ8IYD2 350 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 OR5K1Q8NHB7 308 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 FLVCR1-AS1Q8TAF5 88 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 AHCYL2Q96HN2 611 aaKnown RBP16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 COG8Q96MW5 612 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 MTERF1Q99551 399 aaKnown RBP16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 DOK1Q99704 481 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 DPH7Q9BTV6 452 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 ADNPQ9H2P0 1102 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 SLC6A20Q9NP91 592 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 EVA1BQ9NVM1 165 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 DNAAF2Q9NVR5 837 aaKnown RBP16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 ETAA1Q9NY74 926 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 U3KQV3 271 aa16.11■□□□□ 0.17
CDKN1A-201ENST00000244741 ANKRD33BA6NCL7 494 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 SH3BP5O60239 455 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 E2F6O75461 281 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 CPNE6O95741 557 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 STATHP02808 62 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 PRPS1L1P21108 318 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 CRHBPP24387 322 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 EMP3P54852 163 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 WNT3P56703 355 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 NUP107P57740 925 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 DDX39BQ13838 428 aaKnown RBP16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 MEP1AQ16819 746 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 ARMC6Q6NXE6 501 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 NXPE4Q6UWF7 544 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 MSANTD1Q6ZTZ1 278 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 R3HCC1LQ7Z5L2 792 aaKnown RBP16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 EID3Q8N140 333 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 ZNF555Q8NEP9 628 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 ZNF420Q8TAQ5 688 aaPredicted RBP16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 WDR20Q8TBZ3 569 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 TGM7Q96PF1 710 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 FANCEQ9HB96 536 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 VNN3Q9NY84 501 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 TMEM9Q9P0T7 183 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 HS6ST1O60243 411 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 SCN2BO60939 215 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 MAGP20916 626 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 TGM1P22735 817 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 STT3AP46977 705 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 RPS6KA3P51812 740 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 DCTN2Q13561 401 aaKnown RBP16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 SLBPQ14493 270 aaKnown RBP eCLIP16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 SUZ12Q15022 739 aaKnown RBP16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 CSRP2Q16527 193 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 CTU2Q2VPK5 515 aaKnown RBP16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 CCDC157Q569K6 752 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 RBM48Q5RL73 367 aaKnown RBP16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 SNAP47Q5SQN1 464 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 DHRS4L2Q6PKH6 230 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 AVL9Q8NBF6 648 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 CHDHQ8NE62 594 aaPredicted RBP16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 FCRL4Q96PJ5 515 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 TMEM9BQ9NQ34 198 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 VPS29Q9UBQ0 182 aa16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 TMEFF2Q9UIK5 374 aaPredicted RBP16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 ATXN7L1Q9ULK2 861 aaPredicted RBP16.1■□□□□ 0.17
CDKN1A-201ENST00000244741 GVINP1Q7Z2Y8 2422 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 IGHV1OR21-1A0A087WYE8 117 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 LILRA5A6NI73 299 aa16.09■□□□□ 0.17
CDKN1A-201ENST00000244741 C2orf74A8MZ97 194 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms