RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 ENTPD3O75355 529 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 ATG12O94817 140 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 CDH11P55287 796 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 PON3Q15166 354 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 FBXO42Q6P3S6 717 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 GPR149Q86SP6 731 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 FAM83AQ86UY5 434 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 PIM3Q86V86 326 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 TMEM200AQ86VY9 491 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 GJD3Q8N144 294 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 NTPCRQ9BSD7 190 aaKnown RBP12.37□□□□□ -0.43
VAMP4-201ENST00000236192 DERL2Q9GZP9 239 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 PRDM9Q9NQV7 894 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 IGSF5Q9NSI5 407 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 UXTQ9UBK9 157 aaPredicted RBP12.37□□□□□ -0.43
VAMP4-201ENST00000236192 SLC2A6Q9UGQ3 507 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 PEAK1Q9H792 1746 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 ARPC1BO15143 372 aaKnown RBP12.37□□□□□ -0.43
VAMP4-201ENST00000236192 FLRT2O43155 660 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 LRRTM2O43300 516 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 SSX4O60224 188 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 RB1P06400 928 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 H1F0P07305 194 aaKnown RBP12.37□□□□□ -0.43
VAMP4-201ENST00000236192 POU3F3P20264 500 aaPredicted RBP12.37□□□□□ -0.43
VAMP4-201ENST00000236192 BUD31P41223 144 aaPredicted RBP12.37□□□□□ -0.43
VAMP4-201ENST00000236192 ZNF273Q14593 569 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 SEC23BQ15437 767 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 PLEKHH3Q7Z736 793 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 EMID1Q96A84 441 aaPredicted RBP12.37□□□□□ -0.43
VAMP4-201ENST00000236192 C7orf34Q96L11 122 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 NSUN5Q96P11 429 aaKnown RBP12.37□□□□□ -0.43
VAMP4-201ENST00000236192 ACBD6Q9BR61 282 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 POPDC3Q9HBV1 291 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 TMEM248Q9NWD8 314 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 SAGE1Q9NXZ1 904 aa12.37□□□□□ -0.43
VAMP4-201ENST00000236192 NOSIPQ9Y314 301 aaKnown RBP12.37□□□□□ -0.43
VAMP4-201ENST00000236192 TRBC2A0A5B9 178 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 HBP1O60381 514 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 STK16O75716 305 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 HMGCS1Q01581 520 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 MTAPQ13126 283 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 AAK1Q2M2I8 961 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 SPOUT1Q5T280 376 aaKnown RBP12.36□□□□□ -0.43
VAMP4-201ENST00000236192 ZNF697Q5TEC3 545 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 LYPD4Q6UWN0 246 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 OR8D4Q8NGM9 314 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 PIGXQ8TBF5 258 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 NDC1Q9BTX1 674 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 ZCWPW2A0A1B0GU75 182 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 LRRC72A6NJI9 287 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 MATN3O15232 486 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 AOC2O75106 756 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 TMED4Q7Z7H5 227 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 OR14K1Q8NGZ2 314 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 RHEBL1Q8TAI7 183 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 YIPF5Q969M3 257 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 PIP5K1AQ99755 562 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 MRPL15Q9P015 296 aaKnown RBP12.36□□□□□ -0.43
VAMP4-201ENST00000236192 WRAP73Q9P2S5 460 aaPredicted RBP12.36□□□□□ -0.43
VAMP4-201ENST00000236192 LRFN2Q9ULH4 789 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 SLC27A6Q9Y2P4 619 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 MON2Q7Z3U7 1717 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 FMO6PO60774 539 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 ATG13O75143 517 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 PTP4A3O75365 173 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 HTR4Q13639 388 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 RBM23Q86U06 439 aaKnown RBP12.36□□□□□ -0.43
VAMP4-201ENST00000236192 PINK1Q9BXM7 581 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 EIF5A2Q9GZV4 153 aaKnown RBP12.36□□□□□ -0.43
VAMP4-201ENST00000236192 ACSL6Q9UKU0 697 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 ENTPD4Q9Y227 616 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 SYN3O14994 580 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 CD1DP15813 335 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 ITGB5P18084 799 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 SCNN1GP51170 649 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 PGGT1BP53609 377 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 MAXP61244 160 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 LRRC32Q14392 662 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 H3F3CQ6NXT2 135 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 OAFQ86UD1 273 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 TRMT10AQ8TBZ6 339 aaKnown RBP12.36□□□□□ -0.43
VAMP4-201ENST00000236192 SLC25A46Q96AG3 418 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 FAM193BQ96PV7 902 aaPredicted RBP12.36□□□□□ -0.43
VAMP4-201ENST00000236192 ZNF382Q96SR6 550 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 TMEM43Q9BTV4 400 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 SLC25A51Q9H1U9 297 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 GNG8Q9UK08 70 aa12.36□□□□□ -0.43
VAMP4-201ENST00000236192 TCRBV5S2A0A599 114 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 CCL22O00626 93 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 IFNGP01579 166 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 GKN3PP0CG01 181 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 CBSLP0DN79 551 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 CNR2P34972 360 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 CBSP35520 551 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 SNTB1Q13884 538 aaKnown RBP12.35□□□□□ -0.43
VAMP4-201ENST00000236192 PUM1Q14671 1186 aaKnown RBP eCLIP12.35□□□□□ -0.43
VAMP4-201ENST00000236192 PAFAH1B3Q15102 231 aaKnown RBP12.35□□□□□ -0.43
VAMP4-201ENST00000236192 XKR6Q5GH73 641 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 CPZQ66K79 652 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 PAQR3Q6TCH7 311 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms