RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 CDNFQ49AH0 187 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 GTF2H5Q6ZYL4 71 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 SLC9B2Q86UD5 537 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 OR4D6Q8NGJ1 314 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 ABCG5Q9H222 651 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 C19orf25Q9UFG5 118 aaPredicted RBP10.7□□□□□ -0.7
MSH6-201ENST00000234420 USP2O75604 605 aaPredicted RBP10.7□□□□□ -0.7
MSH6-201ENST00000234420 PAQR8Q8TEZ7 354 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 NIT2Q9NQR4 276 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 SALL1Q9NSC2 1324 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 ALKQ9UM73 1620 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 WTIPA6NIX2 430 aaPredicted RBP10.7□□□□□ -0.7
MSH6-201ENST00000234420 ADAP00813 363 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 IL4RP24394 825 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 GTF2H2Q13888 395 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 TMEM69Q5SWH9 247 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 GTF2H2CQ6P1K8 395 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 ADGRA1Q86SQ6 560 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 HPSE2Q8WWQ2 592 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 OTUB2Q96DC9 234 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 FOLH1BQ9HBA9 442 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 POM121CA8CG34 1229 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 NTRK2Q16620 822 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 PIGGQ5H8A4 983 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 LIPKQ5VXJ0 399 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 C10orf82Q8WW14 230 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 ZNF419Q96HQ0 510 aaPredicted RBP10.7□□□□□ -0.7
MSH6-201ENST00000234420 SNX27Q96L92 541 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 TMEM100Q9NV29 134 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 CDC14AQ9UNH5 594 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 OR4F21O95013 312 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 BDKRB2P30411 391 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 GABRA2P47869 451 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 TAS2R40P59535 323 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 GPX6P59796 221 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 SFRP4Q6FHJ7 346 aaPredicted RBP10.7□□□□□ -0.7
MSH6-201ENST00000234420 OTOP1Q7RTM1 612 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 NOXA1Q86UR1 476 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 GTF2H4Q92759 462 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 DPEP3Q9H4B8 488 aa10.7□□□□□ -0.7
MSH6-201ENST00000234420 CKMT1AP12532 417 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 RARRES1P49788 294 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 DGKQP52824 942 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 SNTB2Q13425 540 aaKnown RBP10.69□□□□□ -0.7
MSH6-201ENST00000234420 MYLK3Q32MK0 819 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 OR7G1Q8NGA0 311 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 LNX1Q8TBB1 728 aaPredicted RBP10.69□□□□□ -0.7
MSH6-201ENST00000234420 ZNF675Q8TD23 568 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 EPS8L1Q8TE68 723 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 BSCL2Q96G97 398 aaPredicted RBP10.69□□□□□ -0.7
MSH6-201ENST00000234420 FAM84AQ96KN4 292 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 CMKLR1Q99788 373 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 ZNF416Q9BWM5 594 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 CNOT11Q9UKZ1 510 aaKnown RBP10.69□□□□□ -0.7
MSH6-201ENST00000234420 WASF3Q9UPY6 502 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 PCDHGB1Q9Y5G3 927 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 OPN1SWP03999 348 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 MMP14P50281 582 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 SLC51AQ86UW1 340 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 ZNF584Q8IVC4 421 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 SLC15A4Q8N697 577 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 HAS2Q92819 552 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 NELFAQ9H3P2 528 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 DNAJC5Q9H3Z4 198 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 MS4A12Q9NXJ0 267 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 NUFIP1Q9UHK0 495 aaKnown RBP10.69□□□□□ -0.7
MSH6-201ENST00000234420 ZFR2Q9UPR6 939 aaKnown RBP10.69□□□□□ -0.7
MSH6-201ENST00000234420 MEIS3P2A8K0S8 358 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 OPN1LWP04000 364 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 DRD5P21918 477 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 SLC2A5P22732 501 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 PREPP48147 710 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 RPL7AP62424 266 aaKnown RBP10.69□□□□□ -0.7
MSH6-201ENST00000234420 C9orf135Q5VTT2 229 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 AQP11Q8NBQ7 271 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 ASB9Q96DX5 294 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 CPEB1Q9BZB8 566 aaKnown RBP10.69□□□□□ -0.7
MSH6-201ENST00000234420 SCML2Q9UQR0 700 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 EVPLQ92817 2033 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 SHROOM3Q8TF72 1996 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 ACOT7O00154 380 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 RFPL3O75679 317 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 SNAPINO95295 136 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 ALDOBP05062 364 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 SHMT1P34896 483 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 CCR8P51685 355 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 TMBIM6P55061 237 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 MLLT10P55197 1068 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 RIPPLY1Q0D2K3 151 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 TMEM198Q66K66 360 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 SUSD1Q6UWL2 747 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 Q6ZVU0 165 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 TRUB1Q8WWH5 349 aaKnown RBP10.69□□□□□ -0.7
MSH6-201ENST00000234420 PNPLA2Q96AD5 504 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 BORCS7Q96B45 105 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 AURKBQ96GD4 344 aaPredicted RBP10.69□□□□□ -0.7
MSH6-201ENST00000234420 ZNF597Q96LX8 424 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 PIP5K1AQ99755 562 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 LRRC3Q9BY71 257 aa10.69□□□□□ -0.7
MSH6-201ENST00000234420 A0A1W2PP55 124 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms