RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 GTF2F2P13984 249 aa12.85□□□□□ -0.35
NEK4-201ENST00000233027 RFC2P35250 354 aa12.85□□□□□ -0.35
NEK4-201ENST00000233027 SH3BP2P78314 561 aa12.85□□□□□ -0.35
NEK4-201ENST00000233027 GHRHRQ02643 423 aa12.85□□□□□ -0.35
NEK4-201ENST00000233027 ZNF792Q3KQV3 632 aa12.85□□□□□ -0.35
NEK4-201ENST00000233027 CDKL4Q5MAI5 379 aa12.85□□□□□ -0.35
NEK4-201ENST00000233027 LY6G5CQ5SRR4 150 aa12.85□□□□□ -0.35
NEK4-201ENST00000233027 RHEBL1Q8TAI7 183 aa12.85□□□□□ -0.35
NEK4-201ENST00000233027 FNDC8Q8TC99 324 aa12.85□□□□□ -0.35
NEK4-201ENST00000233027 GAS2L1Q99501 681 aaPredicted RBP12.85□□□□□ -0.35
NEK4-201ENST00000233027 WDR77Q9BQA1 342 aaPredicted RBP12.85□□□□□ -0.35
NEK4-201ENST00000233027 HAPLN2Q9GZV7 340 aa12.85□□□□□ -0.35
NEK4-201ENST00000233027 UNC119BA6NIH7 251 aa12.85□□□□□ -0.35
NEK4-201ENST00000233027 SLC1A7O00341 560 aa12.85□□□□□ -0.35
NEK4-201ENST00000233027 IL7P13232 177 aa12.85□□□□□ -0.35
NEK4-201ENST00000233027 MAPK3P27361 379 aaPredicted RBP12.85□□□□□ -0.35
NEK4-201ENST00000233027 ARSDP51689 593 aa12.85□□□□□ -0.35
NEK4-201ENST00000233027 SSX6Q7RTT6 188 aa12.85□□□□□ -0.35
NEK4-201ENST00000233027 ASCC1Q8N9N2 400 aaKnown RBP12.85□□□□□ -0.35
NEK4-201ENST00000233027 PSD4Q8NDX1 1056 aa12.85□□□□□ -0.35
NEK4-201ENST00000233027 PXYLP1Q8TE99 480 aa12.85□□□□□ -0.35
NEK4-201ENST00000233027 GTPBP2Q9BX10 602 aaKnown RBP12.85□□□□□ -0.35
NEK4-201ENST00000233027 MKS1Q9NXB0 559 aa12.85□□□□□ -0.35
NEK4-201ENST00000233027 PAQR5Q9NXK6 330 aaPredicted RBP12.85□□□□□ -0.35
NEK4-201ENST00000233027 TAS2R9Q9NYW1 312 aa12.85□□□□□ -0.35
NEK4-201ENST00000233027 ABI3Q9P2A4 366 aa12.85□□□□□ -0.35
NEK4-201ENST00000233027 PCDHGB6Q9Y5F9 930 aa12.85□□□□□ -0.35
NEK4-201ENST00000233027 C12orf71A8MTZ7 269 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 SOX1O00570 391 aaPredicted RBP12.84□□□□□ -0.35
NEK4-201ENST00000233027 AOC2O75106 756 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 TNFRSF1BP20333 461 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 NPRL3Q12980 569 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 FAM180BQ6P0A1 224 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 VTCN1Q7Z7D3 282 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 KLBQ86Z14 1044 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 MINDY1Q8N5J2 469 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 BBS10Q8TAM1 723 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 HSPA12BQ96MM6 686 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 IL17FQ96PD4 163 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 SECISBP2Q96T21 854 aaKnown RBP12.84□□□□□ -0.35
NEK4-201ENST00000233027 SEZ6LQ9BYH1 1024 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 LHPPQ9H008 270 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 ATG5Q9H1Y0 275 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 SACM1LQ9NTJ5 587 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 MAFFQ9ULX9 164 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 CCDC85CA6NKD9 419 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 TIA1P31483 386 aaKnown RBP eCLIP12.84□□□□□ -0.35
NEK4-201ENST00000233027 GABRA3P34903 492 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 MAP2K3P46734 347 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 POU6F2P78424 691 aaPredicted RBP12.84□□□□□ -0.35
NEK4-201ENST00000233027 ZNF252P-AS1Q0IIN9 211 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 LMAN2Q12907 356 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 LRIT3Q3SXY7 679 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 SLC27A4Q6P1M0 643 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 CLECL1Q8IZS7 167 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 SLC15A4Q8N697 577 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 TSTD1Q8NFU3 115 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 OR4K17Q8NGC6 315 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 LMX1AQ8TE12 382 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 CDC14AQ9UNH5 594 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 A0A1B0GVI7 797 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 FDXRP22570 491 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 MLIPQ5VWP3 458 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 STEAP4Q687X5 459 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 ASRGL1Q7L266 308 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 SHFQ7M4L6 423 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 GID4Q8IVV7 300 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 NPWQ8N729 165 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 NUP43Q8NFH3 380 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 CREB3L1Q96BA8 519 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 TMIGD2Q96BF3 282 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 UBQLN2Q9UHD9 624 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 AKAP12Q02952 1782 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 CLCA1A8K7I4 914 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 PLD2O14939 933 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 UQCRC1P31930 480 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 WNT7BP56706 349 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 CCDC58Q4VC31 144 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 XKRXQ6PP77 449 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 PNPLA1Q8N8W4 532 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 OR51A7Q8NH64 312 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 TSPEARQ8WU66 669 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 MAL2Q969L2 176 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 PAAF1Q9BRP4 392 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 HMGB3O15347 200 aaKnown RBP12.84□□□□□ -0.35
NEK4-201ENST00000233027 PABPC4LP0CB38 370 aaKnown RBP12.84□□□□□ -0.35
NEK4-201ENST00000233027 PROZP22891 400 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 HK3P52790 923 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 TBPL1P62380 186 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 TLE2Q04725 743 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 LSAMPQ13449 338 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 PON2Q15165 354 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 NNATQ16517 81 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 PHF19Q5T6S3 580 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 ZDHHC14Q8IZN3 488 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 ZNF565Q8N9K5 539 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 WDR20Q8TBZ3 569 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 HCAR2Q8TDS4 363 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 OR5P2Q8WZ92 322 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 BIRC8Q96P09 236 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms